hkmztrk/DeepDTA

Issues

• Issue regarding the datasets

  #46 opened 2 months ago by matija-marijan
  3

• when use DeepDTA error

  #47 opened 2 months ago by Golden-proteogenomics
  0

• Install tensorflow=1.x needs python>=3.5

  #45 opened 2 months ago by DENGBOYU-REX
  1

• A question about Davis dataset

  #44 opened 6 months ago by realwangjiahao
  1

• Regarding data leakage caused by amino acid sequences in the data set

  #43 opened 8 months ago by kkkayle
  1

• Reimplementation of DeepDTA with Pytorch

  #35 opened a year ago by KSUN63
  2

• During implementation on my own dataset, I got weird results

  #41 opened a year ago by DBpackage
  4

• Question about implementation

  #39 opened a year ago by hanulpark98
  4

• Help with installation

  #37 opened a year ago by lindachiap
  3

• I have some questions, can you help me！！！

  #36 opened a year ago by Sentence99
  1

• new datas

  #34 opened a year ago by kiki-win
  9

• some questions

  #31 opened a year ago by kiki-win
  1

• Help with retraining the combined model with a different dataset

  #33 opened a year ago by KSUN63
  2

• Could the pre-trained model be made available?

  #32 opened 2 years ago by cwognum
  2

• MSE for davis dataset is very high than that is mentioned in the paper

  #30 opened 2 years ago by ashu-jbnu
  5

• Question about KIBA score

  #29 opened 3 years ago by baehaeli
  4

• the question about the two datasets.

  #28 opened 3 years ago by Wenjian-Ma
  2

• Prediction of binding affinity using DeepDTA interpretation

  #25 opened 3 years ago by lmlmmma
  3

• How can I obtain Pickel file Y for my own ligands and protien datasets ?

  #24 opened 3 years ago by shrimonmuke0202
  1

• model save and load

  #20 opened 4 years ago by cgh2797
  2

• Running "S-W and Pubchem-Sim" case from DeepDTA

  #27 opened 4 years ago by SAkbari93
  3

• Complete Code

  #26 opened 4 years ago by fatima711
  1

• The meaning of name for ligands

  #23 opened 4 years ago by pykao
  1

• version of python

  #22 opened 4 years ago by pykao
  1

• DeepDTA: deep drug–target binding affinity prediction

  #8 opened 5 years ago by huiwenwangjn
  12

• error message when I ran /DeepDTA/deepdta-toy/run_experiments.py

  #21 opened 4 years ago by xuzhang5788
  8

• setting up number of training for experiments

  #11 opened 4 years ago by HiPracheta
  7

• arguments.py err

  #19 opened 4 years ago by cgh2797
  1

• What does the data mean?

  #1 opened 4 years ago by Running-z
  22

• Question about cindex_score function

  #18 opened 5 years ago by kyoheikoyama
  3

• How to open Y correctly?

  #17 opened 5 years ago by ZhongYueer
  3

• Filter length

  #16 opened 5 years ago by garcia-nacho
  1

• Adding prediction code?

  #15 opened 5 years ago by zhouhao-learning
  1

• bestparamind is not defined in run_experiments.py

  #14 opened 5 years ago by sathyapatel
  2

• what does Y represent in your deepDTA toy data?

  #10 opened 5 years ago by HiPracheta
  3

• Whether to consider the use of protein 3D structure to predict affinity

  #13 opened 5 years ago by zhouhao-learning
  3

• About Confidence and interval and p value

  #12 opened 5 years ago by Gvinkc
  2

• Some questions about metrics

  #9 opened 5 years ago by OilW
  3

• What is the use of two similarity files in the data?

  #7 opened 5 years ago by zhouhao-learning
  8

• TypeError: read_sets() takes 2 positional arguments but 3 were given

  #6 opened 5 years ago by lorenzoFabbri
  3

• loss value

  #5 opened 6 years ago by guoyanb
  3

• Where can I download Kinese KIBA and Davis datasets?

  #4 opened 6 years ago by LukasChoi
  3

• How to embed proteins using ligands' smiles?

  #3 opened 6 years ago by xuzhang5788
  3

• I’ve tested on my mac

  #2 opened 6 years ago by yuanjun
  5