Intersection sizes not as expected
yesitsjess opened this issue · 1 comments
yesitsjess commented
> head(sort(table(unlist(listInput)), decreasing=T))
2780 8723 13650 14299 709 768
5 5 5 5 4 4
So the entries 2780, 8723, 13650 and 14299 are definitely in all 5 sets.
But the plot, as plotted from this call, shows there are only 2 entries in all 5 sets.
UpSetR::upset(fromList(listInput), order.by="degree", nintersects=NA)
From the venn diagram below I would expect ABCDE = 5 but in my view the upset plot is showing ABCDE = 2.
Have I misunderstood what UpSetR is doing?
yesitsjess commented
I was being daft, I forgot to set nsets and it wasn't showing all of my sets. Apologies for the confusion.