Pinned Repositories
4way-decomposition
Causal mediation and interaction analysis - 4way decomposition - Rscript
ActivePathways
Integrative pathway enrichment analysis of multivariate omics data
awesome-jupyter
A curated list of awesome Jupyter projects, libraries and resources
awesome-mac
Now we have become very big, Different from the original idea. Collect premium software in various categories.
awesome_Chinese_medical_NLP
中文医学NLP公开资源整理：术语集/语料库/词向量/预训练模型/知识图谱/命名实体识别/QA/信息抽取/模型/论文/etc
BatchQC
Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
BDA_R_demos
Bayesian Data Analysis demos for R
CBLUE
中文医疗信息处理基准CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark
scCrossTalk
Infer cell-cell communications based on CellTalkDB
SCNN
Survival Convolutional Neural Networks
hmutanqilong's Repositories
hmutanqilong/scCrossTalk
Infer cell-cell communications based on CellTalkDB
hmutanqilong/awesome_Chinese_medical_NLP
中文医学NLP公开资源整理：术语集/语料库/词向量/预训练模型/知识图谱/命名实体识别/QA/信息抽取/模型/论文/etc
hmutanqilong/BDA_R_demos
Bayesian Data Analysis demos for R
hmutanqilong/CBLUE
中文医疗信息处理基准CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark
hmutanqilong/Chinese-BERT-wwm
Pre-Training with Whole Word Masking for Chinese BERT（中文BERT-wwm系列模型）
hmutanqilong/Chinese_medical_NLP
中文医疗NLP领域 数据集，论文 ，知识图谱，语料，工具包
hmutanqilong/ChineseEHRBert
A Chinese EHR Bert Pretrained Model.
hmutanqilong/docs.hpc.sjtu.edu.cn
SJTU HPC 用户文档站点
hmutanqilong/eMAGMA-tutorial
A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.
hmutanqilong/ESL-CN
The Elements of Statistical Learning (ESL)的中文翻译、代码实现及其习题解答。
hmutanqilong/GWA_tutorial
A comprehensive tutorial about GWAS and PRS
hmutanqilong/gwas
Scripts for GWAS association and metaanalysis
hmutanqilong/gwas_scripts
Codebook from my GWAS cookbook
hmutanqilong/HumanKidney_eQTL_and_snATAC-seq
codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data
hmutanqilong/ImmuneSubtypeClassifier
An R package for classification of immune subtypes, in cancer, using gene expression data.
hmutanqilong/Lihang
Statistical learning methods, 统计学习方法(第2版)[李航] [笔记, 代码, notebook, 参考文献, Errata, lihang]
hmutanqilong/mediator
Causal mediation analysis in R
hmutanqilong/MOFA2
Multi-Omics Factor Analysis
hmutanqilong/NGS-analysis
二代测序数据分析
hmutanqilong/pkuseg-python
pkuseg多领域中文分词工具; The pkuseg toolkit for multi-domain Chinese word segmentation
hmutanqilong/public-resources
Repository for resources we'd like to share with the community.
hmutanqilong/scRNA-seq
hmutanqilong/software-notes
Software notes for data handling and analysis
hmutanqilong/summary-gwas-imputation
harmonization, liftover, and imputation of summary statistics from GWAS
hmutanqilong/tableone
R package to create "Table 1", description of baseline characteristics
hmutanqilong/TMB
肿瘤突变负荷学习笔记（tumor mutation burden）
hmutanqilong/TrialPathfinder
hmutanqilong/WBBC
Westlake BioBank for Chinese pilot project
hmutanqilong/Workshop
课题组每周研讨会
hmutanqilong/XSLab-docs
上科大刘雪松课题组基因组学分析传承与分享知识库