hoelzer/virify

Issues

• Unwrapped module inclusion is deprecated

  #37 opened 4 years ago by Vikash84
  2

• Update VirSorter

  #30 opened 5 years ago by hoelzer
  0

• IMG/VR blast extension

  #17 opened 5 years ago by hoelzer
  4

• ChromoMap to visualize final annotations

  #11 opened 5 years ago by hoelzer
  1

• publishDir error for non-existing plot.tsv files

  #23 opened 5 years ago by hoelzer
  0

• VirFinder with specialized model for euks

  #21 opened 5 years ago by hoelzer
  4

• plot contig map

  #20 opened 5 years ago by hoelzer
  0

• Provide databases directly w/o any download

  #19 opened 5 years ago by hoelzer
  1

• Test simple assembly subworkflow

  #5 opened 5 years ago by hoelzer
  1

• plot_contig_map only for a selection of contigs

  #18 opened 5 years ago by hoelzer
  1

• execution summary

  #16 opened 5 years ago by hoelzer
  1

• Add error strategy for virfinder

  #10 opened 5 years ago by hoelzer
  0

• initial length filter as a optional parameter

  #15 opened 5 years ago by hoelzer
  1

• Phage annotation: PHANOTATE

  #6 opened 5 years ago by hoelzer
  2

• Testing with empty files

  #12 opened 5 years ago by hoelzer
  0

• conda profile

  #4 opened 5 years ago by hoelzer
  1

• Convert hmmscan tbl output to gff

  #9 opened 5 years ago by hoelzer
  0

• hmmscan with --cut_ga parameter needs e-value filters

  #7 opened 5 years ago by hoelzer
  0

• Select a better example file...

  #8 opened 5 years ago by hoelzer
  0

• kmer_freq.py not working

  #3 opened 5 years ago by hoelzer
  1

• viruses.taxid

  #2 opened 5 years ago by hoelzer
  0

• filter_reads is super slow

  #1 opened 5 years ago by hoelzer
  0