hpc-carpentry/old-hpc-workflows
Scaling studies on high-performance clusters using Snakemake workflows
PythonNOASSERTION
Issues
- 2
Consider Parsl
#35 opened by tkphd - 9
Review lesson objectives
#15 opened by tobyhodges - 0
Develop Snakefile on a node
#34 opened by tkphd - 0
Flags on Amdahl
#33 opened by tkphd - 0
Inline Python -> Lesson 10
#32 opened by tkphd - 0
- 4
Discuss limitations & alternatives to Snakemake
#18 opened by tkphd - 0
Create a profile
#29 opened by bkmgit - 1
Rework `index.md`
#4 opened by ocaisa - 4
Plotting Amdahl's Law
#13 opened by ocaisa - 3
Defining the "common workflow" for our lesson
#5 opened by ocaisa - 5
SnakeMake best practices
#16 opened by reid-a - 2
Location of final code products
#17 opened by vinisalazar - 5
Add versions to requirements.txt
#20 opened by bkmgit - 0
Moore's law
#27 opened by bkmgit - 0
Carpentries Workbench
#26 opened by bkmgit - 3
Update `setup.md` for the HPC use case
#3 opened by ocaisa - 1
spelling & linting actions
#8 opened by tkphd - 1
primer docs for sprinters
#7 opened by tkphd - 2
- 1
"Perfect" `snakemake` file for Amdahls Law
#12 opened by ocaisa - 1
protect default branch before sprint
#9 opened by tkphd - 2
Locations where we may need to use templates
#11 opened by ocaisa - 0
Generating our data files
#10 opened by ocaisa - 0
Provenance of this repository
#2 opened by ocaisa