Pinned Repositories
PN2S
awesome-cheminformatics
A curated list of Cheminformatics libraries and software.
HDR_Dataset
A collection of HDR image and video dataset
ImageProcessingTechniques
Curated list of the resources of image processing related techniques
MLDS2017_final
vfx-HDR
HDR (High Dynamic Range Imaging) implemented in MATLAB
genomics-workspace
Django website project for common sequence search tools.
GFF3toolkit
Python programs for processing GFF3 files
remap-gff3
update gff3 coordinates to new assembly versions
FragPipe-Analyst
An easy-to-use and interactive web application for FragPipe
hsiaoyi0504's Repositories
hsiaoyi0504/awesome-cheminformatics
A curated list of Cheminformatics libraries and software.
hsiaoyi0504/504GitExercise
Code to demonstrate simple use of github
hsiaoyi0504/BIOINF593_Final
hsiaoyi0504/blacksheepr
R package for outlier analysis
hsiaoyi0504/CancerSubtypes
If you are still interested in CancerSubtypes
hsiaoyi0504/COVID19-taiwan
Release COVID-19 FDA / NHI drugs screening results.
hsiaoyi0504/cptac
Python packaging for CPTAC data
hsiaoyi0504/docker-gromacs
Dockerfile for Gromcas (http://www.gromacs.org/)
hsiaoyi0504/docker-tutorial
hsiaoyi0504/dotfiles
my dot files (configurations for many tools)
hsiaoyi0504/Great_Lakes_SLURM
Using the Great Lakes cluster and batch computing with SLURM
hsiaoyi0504/GSEApy
Gene Set Enrichment Analysis in Python
hsiaoyi0504/hisat-genotype
hsiaoyi0504/hsiaoyi0504
hsiaoyi0504/hsiaoyi0504.github.io
My personal page (https://hsiaoyi0504.github.io/)
hsiaoyi0504/jieliu6.github.io
generated cv website
hsiaoyi0504/MatrixQCvis
hsiaoyi0504/MPalign
hsiaoyi0504/notes
This repo is for sharing my notes.
hsiaoyi0504/PANOPLY
Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)
hsiaoyi0504/PipeIT
Stand-alone Singularity Container for somatic variant calling on the Ion Torrent platform
hsiaoyi0504/pytorch_fnet
Three dimensional cross-modal image inference
hsiaoyi0504/rdkit
The official sources for the RDKit library
hsiaoyi0504/SI650_final
Blog: https://medium.com/@hsiaoyi/a-new-proteomics-dataset-search-engine-320d63aeb08e
hsiaoyi0504/singularity2docker
convert a singularity image back to Docker, full circle! #containerfriends
hsiaoyi0504/statsmodels
Statsmodels: statistical modeling and econometrics in Python
hsiaoyi0504/CircRNA_MS_ref_fasta
Create an MS reference fasta for circRNAs
hsiaoyi0504/EpiSCORE
Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles
hsiaoyi0504/FragPipe
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
hsiaoyi0504/SuPreMo
Pipeline for generating reference and perturbed sequences for input into predictive models.