NAL-i5K/GFF3toolkit

Issues

• No module named 'gff3tool'

  #138 opened 3 months ago by emilpaulitz
  2

• KeyError: 'replace'

  #75 opened 6 years ago by tiramisutes
  8

• gff3_QC error

  #137 opened 6 months ago by Ziwei-Liu
  3

• Question about gff_merge

  #136 opened 6 months ago by sjtugrc
  1

• gff3_fix error

  #135 opened 7 months ago by Rhinogradentia
  2

• KeyError: 'replace'

  #127 opened 2 years ago by meiyang12
  6

• Extract protein seq

  #131 opened a year ago by bsb2014
  4

• Program gff3_sort encountered an error.

  #130 opened a year ago by wjx121
  0

• Problem with "gff3_ID_generator.py"

  #129 opened 2 years ago by MesYosra
  8

• Error in gff3_fix

  #128 opened 2 years ago by DiegoSafian
  1

• Error when running gff3_ID_generator.py

  #125 opened 2 years ago by B203712-2021
  4

• SeqID does not end with a number.

  #126 opened 2 years ago by tbazilegith
  6

• inquiry about "gff3_to_fasta -st user_defined -u mRNA CDS"

  #124 opened 3 years ago by yanzhongsino
  5

• gff3_fix error

  #118 opened 3 years ago by elor77
  5

• removing models from a list

  #123 opened 3 years ago by dcopetti
  2

• Update error handling in gff3_QC

  #114 opened 3 years ago by mpoelchau
  4

• ValueError: max() arg is an empty sequence

  #117 opened 3 years ago by papelypluma
  3

• Anaconda have something wrong when runing example script

  #113 opened 3 years ago by Ravenclawer
  2

• gff3_merge iteritems error

  #110 opened 4 years ago by chklopp
  3

• gff3_merge user-defined file option does not work in python 3

  #109 opened 4 years ago by mpoelchau
  0

• can't install

  #108 opened 4 years ago by seaward901
  9

• gff3_fix error

  #107 opened 4 years ago by yemao701
  9

• Add Support for GZIP/BGZIP Compressed Files

  #105 opened 4 years ago by ctcncgr
  3

• Pip install

  #104 opened 4 years ago by TommySchooner
  3

• gff3_fix - problem with split function

  #103 opened 5 years ago by mpoelchau
  1

• minor documentation issue: formatting problems in some sections of pdf

  #100 opened 5 years ago by adf-ncgr
  3

• AttributeError: 'NoneType' object has no attribute 'groups'

  #99 opened 5 years ago by lijing28101
  2

• refactor to make unit testing easier

  #88 opened 5 years ago by childers
  3

• Convert to python3

  #94 opened 5 years ago by mpoelchau
  1

• Add argument to generate non-unique CDS IDS for a given mRNA parent feature

  #78 opened 5 years ago by mpoelchau
  8

• install problem in conda env

  #89 opened 5 years ago by thierryjanssens
  3

• error with gff3_sort: missing SeqID

  #85 opened 5 years ago by lassancejm
  8

• Problem with statistics output file in gff3_QC

  #81 opened 6 years ago by mpoelchau
  6

• Switch back to gff3-py

  #80 opened 6 years ago by hsiaoyi0504
  0

• Fix document on readthedocs

  #73 opened 6 years ago by hsiaoyi0504
  3

• gff3_to_fasta.py: using CDS features if exon features are not present is confusing

  #6 opened 7 years ago by mpoelchau
  3

• error message says -st needed, even when supplied

  #5 opened 7 years ago by childers
  2

• How can I fix Ema0003?

  #1 opened 7 years ago by jmsong2
  2