Pinned Repositories
assembly
Streaming assembly for MinION data
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
bcst
Automatically exported from code.google.com/p/bcst
blog-post
CloudBrush
A De Novo Next Generation Genomic Sequence Assembler Based on String Graph and MapReduce Cloud Computing Framework
cobratoolbox
COnstraints Based Reconstruction and Analysis toolbox for MATLAB
constellations
contrail
msa2vcf
npBarcode
Demultiplex the Nanopore barcoding data
hsnguyen's Repositories
hsnguyen/assembly
Streaming assembly for MinION data
hsnguyen/npBarcode
Demultiplex the Nanopore barcoding data
hsnguyen/msa2vcf
hsnguyen/Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
hsnguyen/bcst
Automatically exported from code.google.com/p/bcst
hsnguyen/blog-post
hsnguyen/CloudBrush
A De Novo Next Generation Genomic Sequence Assembler Based on String Graph and MapReduce Cloud Computing Framework
hsnguyen/constellations
hsnguyen/contrail
hsnguyen/fieldbioinformatics
The ARTIC field bioinformatics pipeline
hsnguyen/freecell-aai
Automatically exported from code.google.com/p/freecell-aai
hsnguyen/GenGraph
A repository for the GenGraph toolkit for the creation and manipulation of graph genomes
hsnguyen/genomeGraph
Somethings for genome graph in AMR profiling
hsnguyen/japsa
Just Another JAva Package for Statistical Sequence Analysis
hsnguyen/ksw2
Global alignment and alignment extension
hsnguyen/metagenomic
metagenomic assembler with long reads
hsnguyen/msa-noise-reduction
Automatically exported from code.google.com/p/msa-noise-reduction
hsnguyen/npAnalysis
Software for Nanopore Analysis
hsnguyen/npGraph-manuscript
hsnguyen/npGraph-presentation
hsnguyen/npReader
Read nanopore sequence reads in real-time
hsnguyen/npScarf
hsnguyen/oneliners
Useful bash one-liners for bioinformatics.
hsnguyen/pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
hsnguyen/rt-errors-prediction
Automatically exported from code.google.com/p/rt-errors-prediction
hsnguyen/rt-ranking
Automatically exported from code.google.com/p/rt-ranking
hsnguyen/ru
Read Until scripts
hsnguyen/snippy
:scissors: :zap: Rapid haploid variant calling and core genome alignment
hsnguyen/sublime-installer
A Sublime Text Editor Installer made in shell script for the 2.0.1 version
hsnguyen/Thesis
PhD thesis