hstrey

BDTools.jl

Tools for data analysis of BrainDancer Dynamic Phantom data

BLEShieldConnect

BrainDancer

BrainDancer analysis in Julia

Hidden-Markov-Models-pymc3

Implementation of Hidden Markov Models in pymc3

MicroFluidicsController

Open Hardware Microfluidics Controller Arduino Shield

Modeling-SDEs

here we keep examples of parameter estimation methods for SDEs

Ornstein-Uhlenbeck-AddedNoise

This repository is for work on estimating parameters from data that originates from an Ornstein-Uhlenbeck process with measurement noise

Ornstein-Uhlenbeck-Bayesian

Ornstein-Uhlenbeck-Correlations

this repository contains simulations and functions to estimate parameters from correlated OU-processes

SigmaCamp-2023

code that was developed during SigmaCamp 2023

hstrey/Ornstein-Uhlenbeck-AddedNoise

This repository is for work on estimating parameters from data that originates from an Ornstein-Uhlenbeck process with measurement noise

hstrey/SigmaCamp-2023

code that was developed during SigmaCamp 2023

hstrey/BDTools.jl

Tools for data analysis of BrainDancer Dynamic Phantom data

hstrey/BrainDancer

BrainDancer analysis in Julia

hstrey/Modeling-SDEs

here we keep examples of parameter estimation methods for SDEs

hstrey/BDGui.jl

GUI for BrainDancer

hstrey/NeuroDynamics.jl

A one-stop shop for modeling neural dynamics at any biological scale or level of abstraction.

hstrey/sigma_etapa_2024

repository for code that we used for the probabilistic programming at ETAPA SigmaCamp 2024

hstrey/Catalyst.jl

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.

hstrey/Conductor.jl

Choo-choo

hstrey/DifferentialEquations.jl

Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components

hstrey/DigiWellSeminarieJulia

Files for a presentation for DigiWell Norway seminarie day

hstrey/fMRI-analysis

hstrey/fMRI-correlation-noise

hstrey/FPGA-Correlator

A FPGA linear/multi-tau correlator written in VHDL.

hstrey/GenieTodoMVC

Todo MVC app in Genie 5

hstrey/Intensity-Distribution

this is a paper on the intensity distribution of point emitters with Gaussian illumination

hstrey/julialabs.github.io

JuliaLab Website

hstrey/LuxPlayground

Playing around with LUX.jl

hstrey/matan

test repository

hstrey/ModelingToolkit.jl

A modeling framework for automatically parallelized scientific machine learning (SciML) in Julia. A computer algebra system for integrated symbolics for physics-informed machine learning and automated transformations of differential equations

hstrey/MTK-DDE

ModelingToolkit implementation of Delay Differential Equations

hstrey/MTK9Playground

repository to play with MTK9

hstrey/NIfTI.jl

Julia module for reading/writing NIfTI MRI files

hstrey/NoiseNet

Julia Scripts for the Braindancer Dynamic Phantom

hstrey/OrdinaryDiffEq.jl

High performance differential equation solvers for ordinary differential equations, including neural ordinary differential equations (neural ODEs) and scientific machine learning (SciML)

hstrey/SciML

collection of experiments with SciML using Julia

hstrey/single-cell-circuits

analysis of single-cell measurement using probabilistic programming

hstrey/SmartPacifier

Mobile app designed to work with a Bluetooth pacifier that characterizes sucking of an infant.

hstrey/Sophia-Science-Experiments

here we keep the data and analysis of my daughter's science experiments