Pinned Repositories
BDTools.jl
Tools for data analysis of BrainDancer Dynamic Phantom data
BLEShieldConnect
BME-573-2020
repository for my class iPhone programming for biomedical applications
Hidden-Markov-Models-pymc3
Implementation of Hidden Markov Models in pymc3
MicroFluidicsController
Open Hardware Microfluidics Controller Arduino Shield
Modeling-SDEs
here we keep examples of parameter estimation methods for SDEs
Ornstein-Uhlenbeck-AddedNoise
This repository is for work on estimating parameters from data that originates from an Ornstein-Uhlenbeck process with measurement noise
Ornstein-Uhlenbeck-Bayesian
SigmaCamp-2022
Dynamical System Simulations in Julia
SigmaCamp-2023
code that was developed during SigmaCamp 2023
hstrey's Repositories
hstrey/Ornstein-Uhlenbeck-Bayesian
hstrey/BME-573-2020
repository for my class iPhone programming for biomedical applications
hstrey/covid19
my attempts to making sense (bayesian/probabilistic) of the infection and testing data
hstrey/FPAging
module to create probability distributions from solutions of a Fokker-Planck equation
hstrey/Ornstein-Uhlenbeck-Correlations
this repository contains simulations and functions to estimate parameters from correlated OU-processes
hstrey/SchoolNova-Computer-Science
here I am keeping the code for SchoolNova Computer Science 1&2
hstrey/Single-molecule-FRET-HMM
pymc3 implementation of single molecule FRET hidden Markov model analysis
hstrey/siRNA-silencing
data analysis for siRNA silencing project
hstrey/ants
hstrey/BME-502-2022
repository for my class BME 502: Advanced Numerical Methods for Biomedical Engineering
hstrey/BME-572-2018
Biomolecular Analysis
hstrey/ca-imaging-analysis
hstrey/Circuit-Discovery
Algorithms for Circuit discovery in Neuroscience
hstrey/DEGLITer2_modeling
modeling time series of the optogenetic DEGLITer2 circuit
hstrey/DiffEqDocs.jl
Documentation for the DiffEq differential equations and scientific machine learning (SciML) ecosystem
hstrey/DiffEqGraph
Graphical Representation of Differential Equations
hstrey/FCS-simulations
Brownian simulations to evaluate correlation function fits
hstrey/fMRI-Braindancer-Clone
hstrey/fMRI_BrainDancer
This repository provides code for dynamic phantom data analysis and other utilities for analysis using regular static phantoms, such as the FBIRN phantom. The dynamic phantom is commercially available for purchase from ALA Scientific Instruments, Inc (https://alascience.com/).
hstrey/fpga-photon-counter
creating a photon counter with the Alchitry AU+IO+BR boards
hstrey/Indoor-location-project
hstrey/maxtest
hstrey/MM-kinetics
hstrey/OU-with-noise
Parameter estimation for Ornstein-Uhlenbeck process with noise
hstrey/ou_mult_noise
hstrey/rtl88x2bu
rtl88x2bu driver updated for current kernels.
hstrey/sports-statistics
hstrey/StateSpaceModels.jl
StateSpaceModels.jl is a Julia package for time-series analysis using state-space models.
hstrey/stepbystep
django website for gait sensor
hstrey/U19-Dashboard