Pinned Repositories
16s_microbiome_analysis_workflow
microbiome 16s sequencing analysis from raw sequences to taxonomy and functional prediction.
EV_metaproteomics
Metaproteomics analysis for bacterial extracellular vesicles
huananfshi.github.io
labs
Scripts for HarvardX courses: PH525x
liana
LIANA: a LIgand-receptor ANalysis frAmework
microbiome_multiomics_analysis_workflow
NEUR615_2017
This repository contains code for assignments and exams of Rice University NEUR615 Theoretical Neuroscience
Plethysmography
1) data auto extraction from FileMaker for MATLAB analysis (not included) 2) data analysis for plethysmography from LabChart/PowerLab, using FileMaker Pro database (mice information and experimental information are saved into to the database). 2) exploratory motion removal attempt.
Repiratory-neuron-modeling
A computational model of respiratory neural network: Modeling brainstem respiratory center from single pacemaker to network (final project for Rice NEUR615)
scarches
Reference mapping for single-cell genomics
huananfshi's Repositories
huananfshi/16s_microbiome_analysis_workflow
microbiome 16s sequencing analysis from raw sequences to taxonomy and functional prediction.
huananfshi/microbiome_multiomics_analysis_workflow
huananfshi/EV_metaproteomics
Metaproteomics analysis for bacterial extracellular vesicles
huananfshi/huananfshi.github.io
huananfshi/labs
Scripts for HarvardX courses: PH525x
huananfshi/liana
LIANA: a LIgand-receptor ANalysis frAmework
huananfshi/NEUR615_2017
This repository contains code for assignments and exams of Rice University NEUR615 Theoretical Neuroscience
huananfshi/Plethysmography
1) data auto extraction from FileMaker for MATLAB analysis (not included) 2) data analysis for plethysmography from LabChart/PowerLab, using FileMaker Pro database (mice information and experimental information are saved into to the database). 2) exploratory motion removal attempt.
huananfshi/Repiratory-neuron-modeling
A computational model of respiratory neural network: Modeling brainstem respiratory center from single pacemaker to network (final project for Rice NEUR615)