This a workflowr project, vireo-manual, aims to introduce the method
vireo (Variational Inference for Reconstructing Ensemble Origin), and how to
use it to
- demultiplex your pooled single-cell RNA-seq data easily, no matter without or with (part) genotype reference.
- evaluate experiment designs with our simulator, e.g., number of sequenced reads, donors, and loading cells
- reproduce all analyses we presented in the manuscript.
See the built html pages here.