iGEM Software 2020
Account for the 2020 iGEM Competition season for Software Track teams and for teams who wish to submit code for the tools they have made.
Pinned Repositories
Agro-Q
Agro-Q is a mobile app used to monitor a hydroponics system wirelessly
ClusteRsy-Linkoping
ClusteRsy is a user-friendly software for transcriptome analysis and is developed by the Linköping iGEM team 2020.
Hannover
This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. The project was build as part of the iGEM 2020 Contest. The BiofilmSimulation software can be installed as A python package, documented under https://pypi.org/project/BiofilmSimulation.
Heidelberg_2020
Github repository for the iGEM Team Heidelberg 2020 judging release software.
iGem2020Uppsala
Where we share and collaborate on the code for the iGem 2020 competion
IISER-Pune-India
Design and development of Peptide drugs against falciparum Malaria and a Deep learning Web App for Malaria Diagnosis
IIT_Roorkee_India
Machine Learning model for detecting Antibiotic Resistance genes and Django based REST API for predicting secondary structure of our novel engineered protein.
Synthesis_Navigator
A small synthetic biology tool in development.
SYSU-Software
UiOslo-Norway
iGEM Software 2020's Repositories
igemsoftware2020/Hannover
This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. The project was build as part of the iGEM 2020 Contest. The BiofilmSimulation software can be installed as A python package, documented under https://pypi.org/project/BiofilmSimulation.
igemsoftware2020/Synthesis_Navigator
A small synthetic biology tool in development.
igemsoftware2020/iGem2020Uppsala
Where we share and collaborate on the code for the iGem 2020 competion
igemsoftware2020/Heidelberg_2020
Github repository for the iGEM Team Heidelberg 2020 judging release software.
igemsoftware2020/IISER-Pune-India
Design and development of Peptide drugs against falciparum Malaria and a Deep learning Web App for Malaria Diagnosis
igemsoftware2020/IIT_Roorkee_India
Machine Learning model for detecting Antibiotic Resistance genes and Django based REST API for predicting secondary structure of our novel engineered protein.
igemsoftware2020/ClusteRsy-Linkoping
ClusteRsy is a user-friendly software for transcriptome analysis and is developed by the Linköping iGEM team 2020.
igemsoftware2020/Agro-Q
Agro-Q is a mobile app used to monitor a hydroponics system wirelessly
igemsoftware2020/SYSU-Software
igemsoftware2020/UiOslo-Norway
igemsoftware2020/Chalmers-Gothenburg
igemsoftware2020/Concordia_Montreal
Determine yeast genes regulation in micro-gravity
igemsoftware2020/GunnVistaPingry_US
The code for GunnVistaPingry_US's Odigos Project
igemsoftware2020/Baltimore_BioCrew
github repo for Baltimore Biocrew 2020 software
igemsoftware2020/Lambert_GA
iGEM AgroSENSE Mobile App
igemsoftware2020/Team_Waseda
Team Waseda iGEM 2020
igemsoftware2020/CrispyFinder
igemsoftware2020/Groningen
The population dynamics models focusing on the Globodera pallida nematode and the bacterial biofilm on the roots.
igemsoftware2020/iGEM-Moscow-Kinetic-Model
Kinetic model of the detection system with CasX
igemsoftware2020/igem_epfl_2020
iGEM 2020 CAD and code files
igemsoftware2020/Imperial_College
Automated DNA assembly script generation pipeline for Imperial College iGEM Team 2020 (Software Track).
igemsoftware2020/Ionis_Paris
igemsoftware2020/Moscow_iGEM2020_v2
Kinetic model of the detection system with CasX
igemsoftware2020/optizyme
Optizyme is a software package in R that streamlines the computational modeling and optimization of cell-free biological systems.
igemsoftware2020/Rochester
Codes for Rochester iGEM team modeling and software
igemsoftware2020/SJTU_software_2020
igemsoftware2020/TAU_Israel
This repository contains the two products designed by the Tel Aviv University 2020 iGEM team. These include the EFM Optimizer and the Staubility Enhancer. The compiled software is presented within, as well as the component scripts, and sampled inputs and outputs
igemsoftware2020/Team_UESTC_Software
igemsoftware2020/UIUC_Illinois
GitHub repository for the 2020 Illinois iGEM team project, VIRALIZER.
igemsoftware2020/UNSW_Australia
Web tool for checking if your wiki has the required urls for the medals and awards you intend to contest.