iGEM Software 2020

Account for the 2020 iGEM Competition season for Software Track teams and for teams who wish to submit code for the tools they have made.

Pinned Repositories

Agro-Q
Agro-Q is a mobile app used to monitor a hydroponics system wirelessly
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ClusteRsy-Linkoping
ClusteRsy is a user-friendly software for transcriptome analysis and is developed by the Linköping iGEM team 2020.
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Hannover
This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. The project was build as part of the iGEM 2020 Contest. The BiofilmSimulation software can be installed as A python package, documented under https://pypi.org/project/BiofilmSimulation.
Language:Jupyter Notebook11 7 134
Heidelberg_2020
Github repository for the iGEM Team Heidelberg 2020 judging release software.
Language:Python5 3 02
iGem2020Uppsala
Where we share and collaborate on the code for the iGem 2020 competion
Language:Jupyter Notebook6 3 191
IISER-Pune-India
Design and development of Peptide drugs against falciparum Malaria and a Deep learning Web App for Malaria Diagnosis
Language:Jupyter Notebook5 4 06
IIT_Roorkee_India
Machine Learning model for detecting Antibiotic Resistance genes and Django based REST API for predicting secondary structure of our novel engineered protein.
Language:JavaScript4 3 02
Synthesis_Navigator
A small synthetic biology tool in development.
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SYSU-Software
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UiOslo-Norway
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igemsoftware2020/TAS_Taipei
A lab tool for measuring the pH of solutions over time using pH indicators and visual image or video data
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igemsoftware2020/UC-Davis
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igemsoftware2020/UCAS_2020Software
Machine Evolution
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igemsoftware2020/UNILausanne
Repository to store code for modelling from iGEM UNILausanne team
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igemsoftware2020/RepModel
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igemsoftware2020/Aalto-Helsinki
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igemsoftware2020/AUC-EGYPT
This Repo is maintained by Team AUC-EGYPT
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igemsoftware2020/Brno_Czech_Republic
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igemsoftware2020/Grenoble_Alpes
Official Repository for the software made by the 2020 Grenoble_ Alpes' Team
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igemsoftware2020/Jeu-video
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igemsoftware2020/KCL_UK
Software created by Renervate, KCL iGEM 2020. Here you can find our scaffold degradation simulation program, and our Grasshopper algorithm 'The Porosifier' - of which adds pores to an arbitrary shape
Language:MATLAB
igemsoftware2020/KU_ISTANBUL
GitHub Repository of iGEM KU_ISTANBUL 2020 Team. This repository is created to present setup scripts of computational models built using Lumerical FDTD software.
3 01
igemsoftware2020/Moscow_iGEM2020
Kinetic model of the detection system with CasX