igvteam/igv.js

Issues

• Unwanted request to igv.org for genomes.json despite local genome reference

  #1678 opened a year ago
  3

• Use of ROI when configuring browser

  #1676 opened a year ago
  2

• About [Color By Allele Frequency]

  #1674 opened 7 months ago
  5

• Warning: Range header ignored for URL: http://localhost:PORT/static/path/*.fasta. This can have severe performance impacts.

  #1673 opened a year ago
  2

• Issue with dynamic features colors

  #1669 opened a year ago
  4

• Wiki formatting issue with `$` (accidental mathjax)

  #1667 opened a year ago
  1

• Dynamic track API via genomic range (ie. skip index lookup)

  #1666 opened 6 months ago
  7

• Add ability to create PNG image

  #1665 opened a year ago
  1

• overlayTracks option

  #1664 opened a year ago
  3

• Does 'igv' support typescript?

  #1663 opened 7 months ago
  3

• Feature Request: Events for track adding and ROI changes

  #1661 opened 2 years ago
  2

• Feature request: sort with pairs

  #1658 opened 2 years ago
  0

• Feature Request: Add Regions of interest to downloaded SVG files

  #1655 opened 2 years ago
  2

• Issue loading bgzipped indexed bedGraph files

  #1654 opened 7 months ago
  34

• Is Color alignments by base modification (5mC) supported by igv.js?

  #1650 opened 6 months ago
  4

• Exons of Transcript with no CDS are displayed as non-UTR exons

  #1647 opened 2 years ago
  2

• Color for bigbed track

  #1646 opened 2 years ago
  4

• CORS Firefox

  #1644 opened a year ago
  1

• Colour for track features

  #1643 opened 2 years ago
  4

• It takes forever to load interaction track

  #1642 opened 2 years ago
  2

• HEAD requests for content length?

  #1640 opened 2 years ago
  2

• Feature request, link supplementary alignment

  #1639 opened 2 years ago
  0

• How to upload tracks from client side

  #1638 opened 2 years ago
  4

• Allow comment in fasta header?

  #1634 opened 2 years ago
  4

• Precomputing (and displaying) the alignment coverage track

  #1632 opened 2 years ago
  3

• Inconsistent default values for samplingDepth in wiki and codebase

  #1631 opened 2 years ago
  1

• Annotation track keeps disappearing when I scroll around

  #1633 opened 2 years ago
  24

• HoverText functionality not working

  #1630 opened 2 years ago
  3

• npm install failing due to invalid repository name

  #1629 opened 2 years ago
  1

• Gaps in RNA-Seq coverage tracks

  #1627 opened 2 years ago
  15

• Feature request | Enable custom bed/file formats

  #1626 opened 2 years ago
  7

• search webservice unavailable

  #1625 opened 2 years ago
  1

• Wiki references nonexistent showCursorTrackGuide option

  #1624 opened a year ago
  0

• quotes should not be stripped from GFF3 attribute values

  #1623 opened a year ago
  2

• URL-encoded spaces (and other chars) in BED name field not decoded in igv.js

  #1621 opened 2 years ago
  4

• igv.js v2.15.x import error

  #1619 opened 2 years ago
  7

• annotation tracks no longer displayed as rectangle

  #1618 opened 2 years ago
  9

• Given a certain level of zoom, some tracks freeze

  #1617 opened 2 years ago
  5

• Invisible bigwig track on reverse strand

  #1615 opened 2 years ago
  4

• https://igv.org/genomes/genomes.json does not return json

  #1614 opened 2 years ago
  3

• Using CSP breaks IGV.js

  #1613 opened 2 years ago
  27

• igv-jupyter notebook extension breaking on igv.js

  #1612 opened 2 years ago
  1

• Import tracks from a REST API

  #1611 opened 2 years ago
  3

• For htsget variants source and visibilityWindow = -1 IGV get data only for one chromosome

  #1609 opened 2 years ago
  1

• wigTrack.js "lastNegValue is not defined"

  #1607 opened 2 years ago
  2

• Feature request: filtering of tracks (particularly alignment)

  #1606 opened 2 years ago
  5

• Read alignments from hstget format specifications

  #1605 opened 2 years ago
  6

• Genes in annotation track could not be displayed when pan IGV regions by draging

  #1600 opened 3 months ago
  3

• bed9 itemRgb respected with url, but not with "features" and a JSON table

  #1597 opened 2 years ago
  4

• New tracktype: multi-scale heatmap

  #1595 opened 2 years ago
  1