wig.gz from GEO

Question

wig.gz from GEO

Closed this issue 3 years ago · 5 comments

Not a bug but an ask: GEO archives 1D tracks. While bed.gz seems to load fine this is not the case for wig.gz. Not sure if intended or easy to address. -Olga

Answer 1 · 2021-05-09T06:07:32.000Z

Not intended. Sorry I could probably do this but you can do it faster, can you send me a link to a geo wig.gz file?

Answer 2 · 2021-05-10T01:55:51.000Z

Also, btw, if the wig.gz file (or bed.gz) is too large the browser will likely just hang. There's really nothing we can do about that.

Answer 3 · 2021-05-10T02:14:26.000Z

Understood. I was just surprised to find out that bedpe.gz seemed to work, hence the inquiry. Thanks, Olga

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On May 9, 2021, at 8:56 PM, Jim Robinson ***@***.***> wrote: Also, btw, if the wig.gz file (or bed.gz) is too large the browser will likely just hang. There's really nothing we can do about that. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub, or unsubscribe.

Answer 4 · 2021-05-10T04:26:38.000Z

If you send me a geo link to a wig.gz that's not working I'll investigate, there's no reason I can see it shouldn't work unless its just too large.

Answer 5 · 2021-05-10T16:10:49.000Z

Hey Jim,

Closing this as either I was doing something wrong before or what, but miraculously with 2.1.10 this also worked just fine..

Thanks again for all the fixes!
Olga