Pinned Repositories
igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
igv-notebook
Module for embedding igv.js in an IPython notebook
igv-reports
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
igv.js
Embeddable genomic visualization component based on the Integrative Genomics Viewer
juicebox.js
HiC contact matrix visualization
bioconda-recipes
Conda recipes for the bioconda channel.
hdf5-indexed-reader
hdf5-indexer
pyTwobit
Fast python twobit reader for local and remote files.
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
jrobinso's Repositories
jrobinso/hdf5-indexed-reader
jrobinso/hdf5-indexer
jrobinso/pyTwobit
Fast python twobit reader for local and remote files.
jrobinso/bioconda-recipes
Conda recipes for the bioconda channel.
jrobinso/encode-utils
jrobinso/hicview
Viewer for .hic file metadata
jrobinso/igv.js-electron
Experimentation with electron as a desktop wrapper for ig.js
jrobinso/igv.js-react
Example integration of igv.js and React
jrobinso/igv_wrapper
UMD compatible wrapper around igv.js
jrobinso/jsfive
A pure javascript HDF5 reader
jrobinso/Juicebox
Visualization and analysis software for Hi-C data -
jrobinso/MISO
MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation
jrobinso/modernist
Modernist is a Jekyll theme for GitHub Pages