igvteam/igv-notebook

Issues

• How can show soft clipped regions?

  #27 opened 6 months ago by Manuel-DominguezCBG
  2

• issues with loading reference using absolute URLs

  #30 opened 8 months ago by nettanetta
  2

• No alignments displayed

  #29 opened 9 months ago by snakesch
  16

• Just to confirm, could you explain if the data of my BAM files are analysed locally while using this wonderful library.

  #28 opened 10 months ago by Manuel-DominguezCBG
  3

• bam in mounted directory doesn't load with 'path'

  #26 opened a year ago by mpgriesh
  4

• how to loading other genomes?

  #25 opened a year ago by jkgkn
  1

• Exporting a session to json

  #22 opened a year ago by argschwind
  5

• Save SVG to path

  #24 opened a year ago by justin-delano
  1

• igv.js not displaying in 0.5.1

  #23 opened a year ago by tmtabor
  3

• Hosted file moved?

  #19 opened 2 years ago by yonghaoy
  11

• CRAM version 56 not supported

  #21 opened 2 years ago by emir-radkevich
  3

• JupyterLab URLs

  #20 opened 2 years ago by bcjonescbt
  8

• missing requirements

  #16 opened 2 years ago by jamestwebber
  2

• json typo

  #13 opened 2 years ago by listona
  1

• .version() and .igv_version() methods raise a FileNotFoundError

  #14 opened 2 years ago by safay
  2

• Feature Request - Add ROI support

  #12 opened 2 years ago by gouinK
  1

• BAM not found when using path and indexPath

  #11 opened 2 years ago by SimonDMurray
  4

• to_svg() not working

  #10 opened 2 years ago by KalinNonchev
  13

• feature request for exporting the igv-browser visualization

  #8 opened 2 years ago by KalinNonchev
  2

• Option to allow SVG output

  #6 opened 2 years ago by shunhuahan
  11

• load custom reference genome

  #5 opened 2 years ago by arpanda
  5

• PyPI release

  #2 opened 2 years ago by alimanfoo
  4