Pinned Repositories
eth_thesis_template
Thesis template for Department of Computer Science, ETH Zurich
gnomAD_DB
This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.
mclustpy
Model-based clustering based on parameterized finite Gaussian mixture models. Models are estimated by EM algorithm initialized by hierarchical model-based agglomerative clustering. The optimal model is then selected according to BIC.
WOKO_alert
This script checks the WOKO website for student accommodation in Zurich for new room entries every 6 to 12 min and sends you an email alert if a new room is available.
xgbexcel
Python package that converts an XGBRegressor model to an Excel formula expression.
kipoi
Kipoi's model zoo API
kipoiseq
Standard set of data-loaders for training and making predictions for DNA sequence-based models.
aestetik
AESTETIK: AutoEncoder for Spatial Transcriptomics Expression with Topology and Image Knowledge
simulate_spatial_transcriptomics_tool
Simulate spatial transcriptomics data
ezRun
An R meta-package for the analysis of Next Generation Sequencing data
KalinNonchev's Repositories
KalinNonchev/gnomAD_DB
This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.
KalinNonchev/WOKO_alert
This script checks the WOKO website for student accommodation in Zurich for new room entries every 6 to 12 min and sends you an email alert if a new room is available.
KalinNonchev/mclustpy
Model-based clustering based on parameterized finite Gaussian mixture models. Models are estimated by EM algorithm initialized by hierarchical model-based agglomerative clustering. The optimal model is then selected according to BIC.
KalinNonchev/eth_thesis_template
Thesis template for Department of Computer Science, ETH Zurich
KalinNonchev/xgbexcel
Python package that converts an XGBRegressor model to an Excel formula expression.
KalinNonchev/kipoiseq
Standard set of data-loaders for training and making predictions for DNA sequence-based models.
KalinNonchev/azimuth
A Shiny web app for mapping datasets using Seurat v4
KalinNonchev/blog
Public repo for HF blog posts
KalinNonchev/hail-db
KalinNonchev/KalinNonchev
KalinNonchev/material
Material for STA 426 Fall 2021
KalinNonchev/scanpy
Single-cell analysis in Python. Scales to >1M cells.
KalinNonchev/springer_nature_latex_template
Springer Nature Latex Template
KalinNonchev/STA426
KalinNonchev/tMAE