KalinNonchev/gnomAD_DB

Issues

• Gnomad v4 all populations

  #36 opened 5 months ago by SteampunkIslande
  2

• Discrepancy between allele frequency column (af) and gnomad website

  #35 opened 6 months ago by shwivel
  2

• Question about lcr and segdup

  #34 opened 7 months ago by sophiezhang-origin
  1

• Missing rs ID and south asian allele frequency

  #33 opened 7 months ago by shubham1637
  1

• Question about Exomes and Genomes Filters

  #32 opened 7 months ago by Sophieeeeeeee
  1

• Python script to collect allele frequency for batch of SNPs in gnomAD database

  #30 opened 8 months ago by AR-Shicheng
  1

• Missing variants in v4

  #29 opened 8 months ago by zainomarali
  2

• Variant Not Found in sqlite3 file but found in gnomad4 web

  #28 opened 9 months ago by lbundalian
  10

• Missing variant in Gnomad4 but in Gnomad3

  #27 opened a year ago by lbundalian
  5

• Simultaneously upload gnomAD v4.0.0 wgs and wes file

  #26 opened a year ago by heomanism
  4

• Getting protein changes

  #23 opened a year ago by Michael-Bar
  1

• Limited fields in the gnomAD SQLite database

  #22 opened a year ago by brettChapman
  5

• Generating SQLite preprocessed files from gnomAD

  #21 opened a year ago by brettChapman
  2

• Partial output when recreating database

  #20 opened a year ago by pkiehl2002
  13

• can't find 'AMR' AF in gnomad_db_v3.1.2

  #19 opened 2 years ago by loverlyday
  4

• conda test CircleCI received exit code 137

  #16 opened 2 years ago by KalinNonchev
  4

• query all variants and minor allele frequency for given chromosome

  #5 opened 2 years ago by KalinNonchev
  0

• interval aggregation

  #6 opened 2 years ago by KalinNonchev
  0

• add method documentation

  #7 opened 2 years ago by KalinNonchev
  0

• PRAGMA journal_mode=WAL;

  #11 opened 2 years ago by KalinNonchev
  1

• bump gnomAD v3.1.2

  #17 opened 2 years ago by KalinNonchev
  0

• Output from get_info_from_str

  #15 opened 3 years ago by ichauchcc
  3

• Unable to open database file with gnomAD_DB()

  #13 opened 3 years ago by PabloRomanjo
  2

• gnomad v2.1.1 wgs+wes snp list

  #12 opened 3 years ago by thchen86
  1

• Load mitochondrial data

  #9 opened 3 years ago by bjmain
  5