Pinned Repositories
chromote
Simple wrapper to drive Google Chrome from Python
Flasked-Notebooks
Rendering IPython Notebooks using Flask
flasked-vincent
Vincent/Vega + Flask for ridiculously easy web visuals
game-of-life
Conway's Game Of Life with a small evolutionary twist.
nbtop
IPython Notebook server monitor inspired by htop
sparkline-nb
Render sparkline style charts in pandas dataframes
tweetdns
Keep track of that pesky dynamic IP via twitter.
bonito
A PyTorch Basecaller for Oxford Nanopore Reads
dorado
Oxford Nanopore's Basecaller
fast-ctc-decode
Blitzing Fast CTC Beam Search Decoder
iiSeymour's Repositories
iiSeymour/chromote
Simple wrapper to drive Google Chrome from Python
iiSeymour/sparkline-nb
Render sparkline style charts in pandas dataframes
iiSeymour/nbtop
IPython Notebook server monitor inspired by htop
iiSeymour/game-of-life
Conway's Game Of Life with a small evolutionary twist.
iiSeymour/python-fse
Python binding for Finite State Entropy
iiSeymour/pystreamvbyte
Python bindings for streamvbyte
iiSeymour/dldt
OpenVINO™ Toolkit - Deep Learning Deployment Toolkit repository
iiSeymour/kmer-cnt
Code examples of fast and simple k-mer counters for tutorial purposes
iiSeymour/11Zip
Dead simple zipping / unzipping C++ Lib
iiSeymour/abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
iiSeymour/asitop
Perf monitoring CLI tool for Apple Silicon
iiSeymour/awesome-knowledge-distillation
Awesome Knowledge Distillation
iiSeymour/bamsnap
iiSeymour/ClaraGenomicsAnalysis
SDK for GPU accelerated genome assembly and analysis
iiSeymour/edlib
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
iiSeymour/fast-bonito
iiSeymour/fastx
Just a python fasta/q parser based on kseq.h
iiSeymour/heron
HAC nanopore basecaller
iiSeymour/jemalloc
iiSeymour/minimap2
A fast sequence mapping and alignment program
iiSeymour/onnx
Open Neural Network Exchange
iiSeymour/onnx-tensorflow
Tensorflow Backend and Frontend for ONNX
iiSeymour/parasail-python
Python bindings for the parasail C library.
iiSeymour/pyguppyclient
Python client library for Guppy
iiSeymour/pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
iiSeymour/pytorch-optimizer
torch-optimizer -- collection of optimizers for Pytorch
iiSeymour/rampart
Read Assignment, Mapping, and Phylogenetic Analysis in Real Time
iiSeymour/seqdist
iiSeymour/torch-position-embedding
Position embedding in PyTorch
iiSeymour/zlib-ng
zlib replacement with optimizations for "next generation" systems.