Pinned Repositories
ASD_SS_Mitra_I_2016
ASD sex-specific scripts for Mitra et al 2016
deep-learning-genomics-primer
Contains files for the deep learning in genomics primer.
dragonn
A toolkit to learn how to model and interpret regulatory sequence data using deep learning.
GangSTR
A tool for profiling long STRs from short reads
gtex-estrs-paper
Code and analysis for genome-wide analysis of eSTRs in the GTEx cohort
ileenamitra.github.io
Ileena's Personal Website
kaggle_predict_house_prices
Group analysis to enter for Kaggle contest for: House Prices - Advanced Regression Techniques
TRTools
Toolkit for genome-wide analysis of STRs
vcf_annot_viewer
A bioinformatics tool to easily annotate VCF files and view information, highlighting deterimental variants and their effects.
ileenamitra's Repositories
ileenamitra/ileenamitra.github.io
Ileena's Personal Website
ileenamitra/kaggle_predict_house_prices
Group analysis to enter for Kaggle contest for: House Prices - Advanced Regression Techniques
ileenamitra/TRTools
Toolkit for genome-wide analysis of STRs
ileenamitra/vcf_annot_viewer
A bioinformatics tool to easily annotate VCF files and view information, highlighting deterimental variants and their effects.
ileenamitra/ASD_SS_Mitra_I_2016
ASD sex-specific scripts for Mitra et al 2016
ileenamitra/deep-learning-genomics-primer
Contains files for the deep learning in genomics primer.
ileenamitra/dragonn
A toolkit to learn how to model and interpret regulatory sequence data using deep learning.
ileenamitra/GangSTR
A tool for profiling long STRs from short reads
ileenamitra/gtex-estrs-paper
Code and analysis for genome-wide analysis of eSTRs in the GTEx cohort
ileenamitra/gymreklab-aws-batch
Framework for running jobs on AWS batch
ileenamitra/gymreklab.github.io
jekyll starter theme w/ bootstrap (sass version)
ileenamitra/HipSTR
Genotype and phase short tandem repeats using Illumina whole-genome sequencing data
ileenamitra/snpstr-imputation
Scripts for analyses and figures for SNP STR Imputation manuscript
ileenamitra/ssc-denovos-paper
Scripts and notebooks for generating results in Mitra et al. 2020
ileenamitra/ssc-imputation
ileenamitra/STRDenovoTools
Toolkit for calling and analyzing de novo STR mutations
ileenamitra/STRDenovoTools-A
Toolkit for calling and analyzing de novo STR mutations