Pinned Repositories
alphafold
Open source code for AlphaFold.
CapsNet_MNIST
It's an implemention of Capsule Network with a on MNIST. A Hyperparameter_Control module is also provided there.
capsule-networks
A PyTorch implementation of the NIPS 2017 paper "Dynamic Routing Between Capsules".
GAT-GO
GGS
This repository implements Gibbs sampling with Graph-based Smoothing
LocalCapsulePoolingNetwork
a graph pooling of cluster selecting method using capsule network
Lookhops
MAMS-for-ABSA
A Multi-Aspect Multi-Sentiment Dataset for aspect-based sentiment analysis.
torchkeras
Pytorch❤️ Keras 😋😋
Train_Val_Module_with_Seed
This is a ten_fold_cross Train_Val_Test_Module with manually set seed.
imSeaton's Repositories
imSeaton/GGS
This repository implements Gibbs sampling with Graph-based Smoothing
imSeaton/torchkeras
Pytorch❤️ Keras 😋😋
imSeaton/ACPSC
imSeaton/AF_unmasked
Source code and examples for AlphaFold Unmasked
imSeaton/align-plm
Official code of GenBio@NeurIPS 23 paper, Fine-tuning protein Language Models by ranking protein fitness
imSeaton/AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
imSeaton/AttnPacker
Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"
imSeaton/baichuan-7B
A large-scale 7B pretraining language model developed by Baichuan
imSeaton/ByProt
imSeaton/clash-for-linux-backup
Linux最完整的Clash for Linux的备份仓库，完全可以使用！由Yizuko进行修复及维护
imSeaton/CombFold
imSeaton/ConFit_forked
imSeaton/DiffPepBuilder
Official repository for Target-Specific De Novo Peptide Binder Design with DiffPepBuilder
imSeaton/DLTKcat
Deep learning based prediction of temperature dependent enzyme turnover rates
imSeaton/graph-part
Biological sequence data partitioning method
imSeaton/GraphSite
GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
imSeaton/HEAL
imSeaton/HighFold
imSeaton/HotProtein
[ICLR 2023] "HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing" by Tianlong Chen*, Chengyue Gong*, Daniel Jesus Diaz, Xuxi Chen, Jordan Tyler Wells, Qiang Liu, Zhangyang Wang, Andrew Ellington, Alex Dimakis, Adam Klivans
imSeaton/nomelt
Designing high temperature protein sequences via learned language processing
imSeaton/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
imSeaton/papers_for_protein_design_using_DL
List of papers about Proteins Design using Deep Learning
imSeaton/ProteinMPNN
Code for the ProteinMPNN paper
imSeaton/ProtLGN
imSeaton/ProTrek
ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
imSeaton/RFdiffusion
Code for running RFdiffusion
imSeaton/SaProt
Official implementation of SaProt.
imSeaton/TemStaPro
TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
imSeaton/tensor_parallel
Automatically split your PyTorch models on multiple GPUs for training & inference
imSeaton/xTrimoPGLM