Pinned Repositories
AllelicSeries
Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutations have increasingly large phenotypic effects.
ChannelViT
Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words
ContextViT
Contextual Vision Transformers for Robust Representation Learning
contrastive_vi_plus
Modeling variable guide efficiency in pooled CRISPR screens with ContrastiveVI+
EmbedGEM
EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery
insitro-research
Insitro's repository for public research code and data
kindel
KinDEL is a large DNA-encoded library dataset containing two kinase targets (DDR1 and MAPK14) for benchmarking machine learning models.
opentelemetry-collector-contrib
Contrib repository for the OpenTelemetry Collector
redun
Yet another redundant workflow engine
sams-vae
Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" by Bereket & Karaletsos published in Neurips 2023
insitro's Repositories
insitro/redun
Yet another redundant workflow engine
insitro/ChannelViT
Channel Vision Transformers: An Image Is Worth C x 16 x 16 Words
insitro/insitro-research
Insitro's repository for public research code and data
insitro/EmbedGEM
EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery
insitro/kindel
KinDEL is a large DNA-encoded library dataset containing two kinase targets (DDR1 and MAPK14) for benchmarking machine learning models.
insitro/ContextViT
Contextual Vision Transformers for Robust Representation Learning
insitro/AllelicSeries
Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutations have increasingly large phenotypic effects.
insitro/sams-vae
Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" by Bereket & Karaletsos published in Neurips 2023
insitro/contrastive_vi_plus
Modeling variable guide efficiency in pooled CRISPR screens with ContrastiveVI+
insitro/opentelemetry-collector-contrib
Contrib repository for the OpenTelemetry Collector