Multiomics and spatial transcriptome data input format
shengyongniu opened this issue · 0 comments
shengyongniu commented
Hi there,
I'm trying to use cellxgene on my single-cell multi-omic (RNA+ATAC) dataset and my spatial transcriptomic dataset. I was wondering what is the preferred data input format for cellxgene VIP to read these dataset? Do I just need 2 h5ad files with similar names to read the RNA and ATAC parts of the multiomic data? Thanks!