rloop_genome_instability code acompanying Rloop genome instability paper * Hightlights: R-loop_consensus_regions/output: The folder contains the consensus R-loop regions (bed files) calculated in the paper. (We used the score 200 in the paper, for completeness, score 100 bed region file is also included). * Folder/code structure: - R-loop_consensus_regions: scripts and final output for the consensus regions * Consensus_overlap_analysis │ ├── R-loop_TSS_TES_regions: Intersect Rloop regions with TSS/TES site regions. │ ├── snvs_indels: Analysis SNVs and Indels mutations frequencies in Rloop regions. │ └── structural_variants: Analysis for structural variants breakpoints frequencies in Rloop regions.