ishibaki
Working at RIKEN BDR as a postdoc. I am an expert of Developmental Biology, Biotechnology, Bioinformatics (WGS/RNA-seq/ChIP-seq etc.)
RIKEN BDRKobe
ishibaki's Stars
elgw/deconwolf
Deconvolution of widefield microscopy images and generation of point spread functions
garrettj403/SciencePlots
Matplotlib styles for scientific plotting
nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
smithlabcode/falco
A C++ drop-in replacement of FastQC to assess the quality of sequence read data
traPtitech/traQ
traQ - traP Internal Messenger Application Backend
johnste/finicky
A macOS app for customizing which browser to start
computational-cell-analytics/micro-sam
Segment Anything for Microscopy
sekigon-gonnoc/keyboard-quantizer-doc
Convert your keyboard QMK enabled
royerlab/ultrack
Cell tracking and segmentation software
kha-white/manga-ocr
Optical character recognition for Japanese text, with the main focus being Japanese manga
MuiseDestiny/zotero-reference
PDF references add-on for Zotero.
l0o0/tara
A Zotero add-on for backup and restore preferences, add-ons, translators, styles, and locate between two machines
MuiseDestiny/zotero-figure
一个基于 PDFFigure2 的 PDF 图表解析插件
jalvesaq/zotcite
Neovim plugin for integration with Zotero
jaks6/citation_map
Create a Gephi Citation Graph based on Text Analysis of PDFs from Zotero
phiresky/ripgrep-all
rga: ripgrep, but also search in PDFs, E-Books, Office documents, zip, tar.gz, etc.
SeitaroShinagawa/FavoritePapers
dair-ai/Prompt-Engineering-Guide
🐙 Guides, papers, lecture, notebooks and resources for prompt engineering
DamCB/tyssue
An epithelium simulation library
facebookresearch/segment-anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
RMS-DAIM/Python-for-Bioimage-Analysis
This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biological imaging.
VioletGiraffe/FasterThanSight
Desktop speed reading software for Windows, Mac and Linux
trevismd/statannotations
add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.
mmcnair91/ACEAE-Labs
Home for all my 3D printable scientific designs
mmcguffi/pLannotate
Webserver and command line tool for annotating engineered plasmids
f/awesome-chatgpt-prompts
This repo includes ChatGPT prompt curation to use ChatGPT better.
open-mmlab/mmdetection
OpenMMLab Detection Toolbox and Benchmark
AppFlowy-IO/AppFlowy
Bring projects, wikis, and teams together with AI. AppFlowy is an AI collaborative workspace where you achieve more without losing control of your data. The best open source alternative to Notion.
pbs-assess/sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
tidymodels/rsample
Classes and functions to create and summarize resampling objects