Pinned Repositories
AREM
AREM -- Aligning Reads by Expectation-Maximization
bedtools
A powerful toolset for genome arithmetic.
biopython
Official git repository for Biopython (converted from CVS)
git-cola
git-cola: The highly caffeinated git GUI
HTS-waterworks
A Ruffus pipeline for Analysis of High-Throughput Sequencing data
ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
pybedtools
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
pymc
Bayesian inference in Python
ruffus
Ruffus is a lightweight python module for running computational pipelines.
jakebiesinger's Repositories
jakebiesinger/HTS-waterworks
A Ruffus pipeline for Analysis of High-Throughput Sequencing data
jakebiesinger/AREM
AREM -- Aligning Reads by Expectation-Maximization
jakebiesinger/bedtools
A powerful toolset for genome arithmetic.
jakebiesinger/git-cola
git-cola: The highly caffeinated git GUI
jakebiesinger/pybedtools
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
jakebiesinger/pymc
Bayesian inference in Python
jakebiesinger/StarCluster
StarCluster is a utility for creating and managing computing clusters hosted on Amazon's Elastic Compute Cloud (EC2).
jakebiesinger/biopython
Official git repository for Biopython (converted from CVS)
jakebiesinger/ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
jakebiesinger/ruffus
Ruffus is a lightweight python module for running computational pipelines.
jakebiesinger/charityada.org
jakebiesinger/cloud-builders
Supported builder images for Google Cloud Build
jakebiesinger/cotools
functional tools for cooperative multitasking.
jakebiesinger/dbt-core
dbt (data build tool) is a command line tool that enables data analysts and engineers to transform data in their warehouse more effectively.
jakebiesinger/dotfiles
jakebiesinger/Fling
Fling media to a ChromeCast device
jakebiesinger/git-cl
a git-command for integrating reviews on Rietveld
jakebiesinger/google-code-issues-migrator
A simple script to migrate issues from google code to github.
jakebiesinger/incubator-airflow
Apache Airflow (Incubating)
jakebiesinger/motility
jakebiesinger/PyGithub
Python library implementing the full Github API v3
jakebiesinger/RstPreview
RstPreview - a SublimeText plugin to view RST files in your browser.
jakebiesinger/scikit-learn
scikit-learn: machine learning in Python
jakebiesinger/vaderSentiment
VADER Sentiment Analysis. VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool that is specifically attuned to sentiments expressed in social media, and works well on texts from other domains.