jameshadfield/phandango

Issues

• GWAS manhattan plot not displaying colours when kmer/unitig positions (e.g. 140..160) used

  #151 opened 4 months ago by rgladstone
  5

• figure download

  #150 opened 5 months ago by ghazalaziz
  1

• genome_analysis

  #149 opened 6 months ago by mbaifeanyi
  0

• Metadata is not being displayed

  #147 opened 8 months ago by mirulee
  4

• meatdata does not appear

  #148 opened 8 months ago by ManhongYe74
  1

• add scale bar

  #120 opened 7 years ago by leosanbu
  4

• [GWAS] All SNPs plotted only in first contig

  #146 opened 10 months ago by lawleyjw
  2

• extracting numeric data from the graph at the base of the page

  #145 opened 2 years ago by pjbiggs
  2

• How to prepare input whole genome alignment files for gubbins

  #144 opened 2 years ago by aslangabriel
  0

• Clarification of genome size presented

  #143 opened 2 years ago by lauramataseje
  1

• Graph of recombination events algorithm

  #142 opened 2 years ago by valery-shap
  4

• How can I color the branches of the tree directly as in the example？

  #141 opened 3 years ago by actledge
  2

• How to save complete image of a results

  #140 opened 3 years ago by sekhwal
  0

• TypeError: Cannot read property 'length' of undefined

  #139 opened 3 years ago by MBinso
  0

• Roary gene_Presence_Absence.csv file is not being displayed

  #138 opened 3 years ago by LilCros
  5

• No clear instructions of how to even install this tool

  #137 opened 3 years ago by zmunro
  1

• Print screen causes tree width to reset

  #128 opened 6 years ago by simonrharris
  4

• Gubbins output colors

  #136 opened 4 years ago by maguileraf
  1

• Scoary gwas output

  #135 opened 4 years ago by pavlo888
  1

• data cannot be displayed?

  #124 opened 6 years ago by korinalb
  2

• Error encountered on Phandango site

  #134 opened 6 years ago by herricjb
  3

• Ability to change tree labels using metadata columns

  #133 opened 6 years ago by simonrharris
  2

• Gubbins output

  #123 opened 6 years ago by mariemh23
  10

• Display recombination hotspot

  #131 opened 6 years ago by mariemh23
  0

• Allow hex colours in gff files

  #129 opened 6 years ago by simonrharris
  1

• rooting phylogenetic tree at the outgroup branch

  #127 opened 6 years ago by cirodri1
  1

• Citation link is broken

  #125 opened 6 years ago by happykhan
  3

• Clearing warnings

  #126 opened 6 years ago by simonrharris
  0

• Metadata block interference patterns

  #122 opened 7 years ago by simonrharris
  1

• fastGEAR

  #118 opened 7 years ago by jameshadfield
  0

• large metadata sets don't fill up the panel (horizontal direction)

  #102 opened 8 years ago by jameshadfield
  0

• change pan genome scale from bases to gene numbers (INT)

  #101 opened 8 years ago by jameshadfield
  0

• Bottom panel resets when redrawing original tree

  #119 opened 7 years ago by simonrharris
  0

• Gene Markers?

  #116 opened 7 years ago by mattbawn
  4

• finite number of labels in continuous scale key

  #117 opened 7 years ago by jameshadfield
  0

• Big gene_presence_absence file

  #110 opened 7 years ago by ivaatanas
  3

• add bioRxiv link to landing page without breaking everything

  #112 opened 7 years ago by jameshadfield
  1

• Change Metadata Column Order

  #115 opened 7 years ago by jameshadfield
  0

• Metadata zooming

  #114 opened 7 years ago by jameshadfield
  0

• purchase phandango.net

  #113 opened 7 years ago by jameshadfield
  1

• Web App Error (TypeError: Cannot read property 'cleanup' of undefined)

  #111 opened 7 years ago by jchen232
  2

• ROARY parsing improvements

  #109 opened 8 years ago by jameshadfield
  0

• variable font size on tree

  #108 opened 8 years ago by jameshadfield
  0

• improve browser detection / testing

  #107 opened 8 years ago by jameshadfield
  0

• Movable GWAS threshold

  #105 opened 8 years ago by johnlees
  0

• "TypeError: Array.from is not a function" Polyfill needed

  #106 opened 8 years ago by jameshadfield
  0

• [metadata key] not all values should be displayed if there are lots

  #104 opened 8 years ago by jameshadfield
  0

• don't remount canvas nodes when settings panel opens / closes

  #103 opened 8 years ago by jameshadfield
  0

• metadata colour input

  #99 opened 8 years ago by jameshadfield
  0

• metadata key for groups only shows values in first column of that group

  #100 opened 8 years ago by jameshadfield
  0