jamesmbaazam
Research Software Engineer, working on the Epiverse Initiative at LSHTM. Mostly work with/in R.
London School of Hygiene and Tropical MedicineUnited Kingdom
jamesmbaazam's Stars
wch/r-source
Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page.
Tazinho/Advanced-R-Solutions
Set of solutions for the Advanced R programming book
Everything-Open-Source/open-source-events
A list of Open Source conferences or events to look out for.
royal-statistical-society/datavisguide
Introductory guide to the art and science of data visualisation. Insights, advice, and examples (with code) to make data outputs more readable, accessible, and impactful.
TidierOrg/TidierData.jl
Tidier data transformations in Julia, modeled after the dplyr/tidyr R packages.
betanalpha/stan_intro
Draft introduction to probability and inference aimed at the Stan manual.
TimTeaFan/loopurrr
Translate purrr functions into regular for loops
vincentarelbundock/rethinking2
spinkney/helpful_stan_functions
r-lib/generics
Common generic methods
jonocarroll/purrr2for
Automagically Convert purrr R Calls to Efficient Julia for Loops
CDCgov/wastewater-informed-covid-forecasting
Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub
r-hub/rhub2
The 'R-hub' package builder, v2
epiforecasts/forecast.vocs
Contains models and tools to produce short-term forecasts for both case and sequence notifications assuming circulation of either one or two variants. Tools are also provided to allow the evaluation of the use of sequence data for short-term forecasts in both real-world settings and in user generated scenarios.
OvertonC/Transmission-Dynamics-of-Monkeypox-in-the-United-Kingdom
Repository containing stan models for estimating delay distributions in the presence of right-truncation, epidemic phase, and interval-censoring biases
dajmcdon/rtestim
epiforecasts/nowcasting.example
Estimate reporting delays and use them for nowcasting
kathsherratt/r-for-research
Materials developed for a workshop at LSHTM introducing good practices using R for research
open-courses-statistics-data-science/introduction_to_stan
A half-day course providing an introduction to Stan
OvertonC/nowcasting_the_2022_mpox_outbreak_in_england
Code and data associated with the paper "Nowcasting the 2022 mpox outbreak in England"
jamesmbaazam/awesome-python-data-science
Probably the best curated list of data science software in Python.
jamesmbaazam/Bayesian-Modelling-in-Python
A python tutorial on bayesian modeling techniques (PyMC3)
jamesmbaazam/covid19_stan_model_template
Example model that runs very simple COVID model
jamesmbaazam/mobility
An R package containing functions for parsing mobility data, fitting models using Bayesian inference, and simulating mobility patterns.
jamesmbaazam/nowcasting_COVID19
Now-casting Japan during the COVID-2019 Pandemic at the beginning of March 2020
jamesmbaazam/RcppRoll
Fast rolling functions through Rcpp
jamesmbaazam/recon_docker
Various docker images for RECON
jamesmbaazam/stan-statespace
Stan models for state space time series
jamesmbaazam/Stan_SIR_model
Well documented example of (S)usceptible, (I)nfectious, (R)esolved model for influenza
jamesmbaazam/statistical_rethinking_rstan_translation
Examples from McElreath's Statistical Rethinking, First edition coded in Stan.