jasonserviss's Stars
msberends/clean
Fast and Easy Data Cleaning (in R)
divyanshu-talwar/AutoImpute
AutoImpute : Autoencoder based imputation of single cell RNA-seq data
r-hub/rhub
R-hub API client
immunogenomics/harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
pridiltal/staplr
PDF Toolkit. :paperclip: :hammer: :wrench: :scissors: :bookmark_tabs: :file_folder::paperclip: :bookmark: :construction: :construction_worker:
czbiohub-sf/tabula-muris
Code and annotations for the Tabula Muris single-cell transcriptomic dataset.
hrbrmstr/freebase
👃🏽A 'usethis'-like Package for Base R Pseudo-equivalents of 'tidyverse' Code
yonicd/bplyr
basic dplyr and tidyr functionality without the tidyverse dependencies
KlugerLab/t-SNE-Heatmaps
Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq
HenrikBengtsson/globals
🌐 R package: Identify Global Objects in R Expressions
hemberg-lab/scRNA.seq.datasets
Collection of public scRNA-Seq datasets used by our group
r-lib/vdiffr
Visual regression testing and graphical diffing with testthat
workflowr/workflowr
Organize your project into a research website
tidyverse/glue
Glue strings to data in R. Small, fast, dependency free interpreted string literals.
brodieG/diffobj
Compare R Objects with a Diff
Pakillo/grateful
Facilitate citation of R packages
r-lib/desc
Manipulate DESCRIPTION files
dynverse/dyno
Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕
KrishnaswamyLab/MAGIC
MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
mschubert/clustermq
R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH
tensorflow/tfjs-tsne
gjhunt/dtangle
Cell type deconvolution from high-throughput gene expression profiling experiments.
thomasp85/patchwork
The Composer of ggplots
r-lib/usethis
Set up commonly used 📦 components
Pakillo/template
A template for data analysis projects structured as R packages (or not)
broadinstitute/infercnv
Inferring CNV from Single-Cell RNA-Seq
hadley/secure
Secure private R data in public packages
dgrun/StemID
Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.