/synthqc

quality analysis/control for synthesis

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synthqc

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This package supports a suite of quality analysis programs for MR/CT image synthesis.

We also support a DNN-based and non-DNN-based synthesis package called synthnn and synthit, respectively.

** Note that this is an alpha release. If you have feedback or problems, please submit an issue (it is very appreciated) **

This package was developed by Jacob Reinhold and the other students and researchers of the Image Analysis and Communication Lab (IACL).

Link to main Gitlab Repository

Requirements

  • matplotlib
  • nibabel
  • numpy
  • scikit-image

Installation

pip install git+git://github.com/jcreinhold/synthqc.git

Tutorial

5 minute Overview

Test Package

Unit tests can be run from the main directory as follows:

nosetests -v tests