jeliason
Bioinformatics PhD student working in computational and statistical histopathology at the University of Michigan
University of Michigan
Pinned Repositories
AgentNet
Pytorch implementation of AgentNet, which is designed for reveal hidden interactions and predict future dynamics of the unknown complex system.
AWS-JPL-OSR-Challenge
Official repo of the AWS-JPL Open Source Rover challenge
b545_g4_project
bioinf593_final_project
Final project for Bioinf 593: ML in Comp Bio
brain_stat_graph
Experiments in statistics of networks, using brain connectivity graphs
hippo
Using state space models on neural spiking data in the hippocampus
school_projects
Several notable projects done while at Northwestern
scrna_analysis
A repository containing my investigations into single-cell RNAseq analysis, especially as applied to cancer
spatialkmeans
Single-cell spatial omics clustering, incorporating the physical distance between cells into the omics distance. This penalizes cells that are further away from being in the same cluster.
DIMPLE
jeliason's Repositories
jeliason/AWS-JPL-OSR-Challenge
Official repo of the AWS-JPL Open Source Rover challenge
jeliason/brain_stat_graph
Experiments in statistics of networks, using brain connectivity graphs
jeliason/ds_practice
Data science practice portfolio
jeliason/school_projects
Several notable projects done while at Northwestern
jeliason/coach
Reinforcement Learning Coach by Intel AI Lab enables easy experimentation with state of the art Reinforcement Learning algorithms
jeliason/Data-Analysis-and-Machine-Learning-Projects
Repository of teaching materials, code, and data for my data analysis and machine learning projects.
jeliason/demo_site
jeliason/dynsys-SSR
jeliason/f31-templates
Latex templates for submitting the NIH F31 grant
jeliason/fellow_fins
Allows fellow Fins to learn and remember each other's names at Dolphin School!
jeliason/glbinc
Grouped Lasso (and maybe more) for logistic regression with offsets and sparse matrix support
jeliason/isv_neuroscience
Interactive steering and visualization tool for neural network simulations in neuroscience
jeliason/jeliason.github.io
jeliason/KataGo
GTP engine and self-play learning in Go
jeliason/looptimer
Time calculation for loops in R, to get some idea how long I need to wait.
jeliason/MobileNetV2
A Keras implementation of MobileNetV2.
jeliason/neurosim
Contains Dockerfiles and notebooks for the analysis of spatiotemporal patterns (STPs) in neuronal networks
jeliason/PenGE
Penalised Gibbs model Estimation
jeliason/PhysiCell-EMEWS
Official code repository for the PhysiCell-EMEWS project
jeliason/plasticity
Uses Auryn neuronal simulation software to simulate plasticity
jeliason/PyCX
PyCX is a Python-based sample code repository for complex systems research and education.
jeliason/pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
jeliason/pymc4
A high-level probabilistic programming interface for TensorFlow Probability
jeliason/serverless-application-model
AWS Serverless Application Model (SAM) is an open-source framework for building serverless applications
jeliason/tissue-structure-modulates-evolution
Code repository associated with the paper "Tissue structure modulates evolution: premalignant sweeps precede neutral expansion"