jessieno

Uppsala universitetUppsala

Pinned Repositories

git_tutorial
Language:Python0 1 00
home
Config files
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piper
The SnpSeqPipeline rebooted
Language:Scala0 0 00
piper
A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (make sure you fork from there)
Language:Scala21 8 324
epiqc
Language:R2 11 02
multiseq-ds
Language:R0 11 00
Nordlund-ALL-subtyping
DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia
Language:R2 14 01
Nordlund-Backlin-2013
Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia
Language:R6 14 14
SDashboard
A visualization app written in Shiny to show sequencing metrics
Language:R0 14 05
sisyphus
Pipeline scripts for processing and QC of Illumina HiSeq and MiSeq data
Language:Perl2 16 3010