jgilis
Postdoctoral researcher at Chalmers (Sweden) working with genome-scale metabolic models. Previously PhD in Ghent (Belgium) developing scRNA-seq analysis tools
ChalmersGothenburg, Sweden
Pinned Repositories
GEEutils
Aggregation of utility functions for working with Generalized Estimation Equations
iSEEtranscripts
Unlock iSEE for transcript-level visualization
jgilis.github.io
Personal website of Jeroen Gilis
Medusa
Analysis of ensembles of metabolic network reconstructions
muscat
Multi-sample multi-group scRNA-seq analysis tools
optlang
optlang - sympy based mathematical programming language
pitfallsOfHumanPathologyAtlas
This repository accompanies our publication in which we revisit the statistical analyses of the human pathology atlas. In this re-analysis, we highlight several pitfalls in the original workflow and suggest how these pitfalls can be avoided in the future.
satuRn_jgilis
pitfallsOfHumanPathologyAtlas
satuRn
satuRn is a highly performant and scalable method for performing differential transcript usage analyses.
jgilis's Repositories
jgilis/iSEEtranscripts
Unlock iSEE for transcript-level visualization
jgilis/jgilis.github.io
Personal website of Jeroen Gilis
jgilis/pitfallsOfHumanPathologyAtlas
This repository accompanies our publication in which we revisit the statistical analyses of the human pathology atlas. In this re-analysis, we highlight several pitfalls in the original workflow and suggest how these pitfalls can be avoided in the future.
jgilis/GEEutils
Aggregation of utility functions for working with Generalized Estimation Equations
jgilis/Medusa
Analysis of ensembles of metabolic network reconstructions
jgilis/muscat
Multi-sample multi-group scRNA-seq analysis tools
jgilis/optlang
optlang - sympy based mathematical programming language
jgilis/satuRn_jgilis