Pinned Repositories
cat12-docker
Docker image of CAT12 (standalone version)
cat12_denoise-docker
CAT12 image denoising as a Docker container
docker-images
Dockerfiles and metadata for XNAT's container service
fsl_oxford_asl-docker
FSL oxford_asl Docker image
quality-assessment-protocol
Scripts and documentation for the PCP's protocol for assessing data quality.
WAD_Python
WAD analyse modules in Python
xnat-modules
XNAT modules repo
xnat-pipelines
XNAT pipelines repository
jhuguetn's Repositories
jhuguetn/xnat-pipelines
XNAT pipelines repository
jhuguetn/cat12-docker
Docker image of CAT12 (standalone version)
jhuguetn/xnat-modules
XNAT modules repo
jhuguetn/fsl_oxford_asl-docker
FSL oxford_asl Docker image
jhuguetn/WAD_Python
WAD analyse modules in Python
jhuguetn/cat12_denoise-docker
CAT12 image denoising as a Docker container
jhuguetn/ctp-daemon-service
Linux scripts for CTP Java daemon service manager (branches: sysVinit and systemd/master)
jhuguetn/docker-images
Dockerfiles and metadata for XNAT's container service
jhuguetn/quality-assessment-protocol
Scripts and documentation for the PCP's protocol for assessing data quality.
jhuguetn/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
jhuguetn/freesurfer
Neuroimaging analysis and visualization suite
jhuguetn/markup
The code we use to render README.your_favorite_markup
jhuguetn/mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
jhuguetn/nibabel
Python package to access a cacophony of neuro-imaging file formats
jhuguetn/nilearn
Machine learning for NeuroImaging in Python
jhuguetn/nipype
Workflows and interfaces for neuroimaging packages
jhuguetn/nisnap
Display segmentation results over MRI scans in Jupyter notebooks.
jhuguetn/pyxnat
XNAT in Python
jhuguetn/QSMxT
jhuguetn/recon-stats
Parse stats outputs from recon-all
jhuguetn/WAD_Interface
NVKF WAD webinterface
jhuguetn/WAD_Services
Bundle of WAD_Collector, WAD_Selector and WAD_Processor
jhuguetn/xcp_d
post processing of fmriprep , nibabies, hcp and dcan,
jhuguetn/XNAT-Dashboards
Dashboards for XNAT
jhuguetn/xnat-plugins
XNAT plugins repository
jhuguetn/xnat-scripts
XNAT-related client scripts repository
jhuguetn/xnat4tests
A Python module that stands up a basic XNAT repository in a single Docker container to be used in testing pipelines interact with the XNAT API and/or container service