Docker image including a minimal selection of FSL 6.0.7.7 packages required
to run oxford_asl
tools from FSL
library.
Find the image in Docker Hub here.
- Ubuntu 20.04 LTS (Focal Fossa)
- conda-forge Miniforge3 23.11.0-0
- FSL 6.0.7.7 packages:
- fsl-oxford_asl (v4.0.29)
- fsl-flirt (2111.2)
- fsl-bet2 (2111.7)
- fsl-base (2401.0)
- fsl-utils (2203.4)
- fsl-misc_scripts (2111.0)
- fsl-data_standard (2208.0)
docker run -it --rm -v `pwd`/data:/data jhuguetn/fsl_oxford_asl \
asl_reg -i /data/pCASL.nii.gz -s /data/T1w.nii -o /data/output
Jordi Huguet (BarcelonaBeta Brain Research Center)