jkimlab/msPIPE

Issues

• Issue with modifying the core

  #16 opened 2 months ago by Dilip123-cell
  2

• REFERENCE entries

  #15 opened 2 months ago by knokknok
  0

• problem with bismark on sorted.bam

  #10 opened a year ago by ppswang
  1

• error calling methylation with non UCSC genome

  #14 opened 8 months ago by JUxueML
  1

• Can I use a genome that is not registered in the UCSC Genome Browser?

  #11 opened a year ago by kondo-yuri
  5

• error in visualization and DMR analysis

  #13 opened 9 months ago by GabrieleRigano99
  0

• Error in Hypomethylated region analysis

  #12 opened 10 months ago by scintilla9
  2

• Is Arabidopsis thaliana available for msPIPE (species that do not have UCSC version name)?

  #9 opened a year ago by ZhujunYao
  1

• issue with target directory after Mapping usind docker

  #2 opened 2 years ago by criphg
  8

• RRBS

  #8 opened a year ago by knokknok
  1

• GMA.Circos.R: not found

  #4 opened a year ago by rockman507
  0

• methylation extraction fails after mapping with multiple cores

  #3 opened 2 years ago by rockman507
  2

• MethylSeekR non-numeric argument to binary operator

  #7 opened 2 years ago by rockman507
  0

• MethylSeekR using deprecated call

  #6 opened 2 years ago by rockman507
  0

• bed2win calling <dir>/Analysis/Ideogram.bed/Analysis/Ideogram.bed

  #5 opened 2 years ago by rockman507
  0

• Define threads number using docker image

  #1 opened 2 years ago by criphg
  1