Pinned Repositories
myco
WIP pipeline built for phylogenic analysis of the Mycobacterium tuberculosis complex (MBTC)
transflow
A snakemake workflow for WGS-based tuberculosis transmission analysis
TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
MycoVarP-nf
Msm_stress
This repository was created to share the pipeline and analysis of WGS data of Mycobacterium smegmatis.
jloubser's Repositories
jloubser/myco
WIP pipeline built for phylogenic analysis of the Mycobacterium tuberculosis complex (MBTC)
jloubser/transflow
A snakemake workflow for WGS-based tuberculosis transmission analysis