Pinned Repositories
AGM_GFP
AGM_GFP_NEG_A
AGM_GFP_POS_B
AL_KDR
arrays
A Snakemake workflow to analyse Affymetrix expression arrays
chromium
A Snakemake workflow to process scRNA-seq data from 10x Genomics
Daim
A Bioconductor package for analysis of DamID-seq data
jcutils
Josh Cowley's Utility functions for R
rnaseq
A workflow for RNA-seq analyses in Snakemake
rnasplice
rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
jma1991's Repositories
jma1991/chromium
A Snakemake workflow to process scRNA-seq data from 10x Genomics
jma1991/jcutils
Josh Cowley's Utility functions for R
jma1991/AL_KDR
jma1991/arrays
A Snakemake workflow to analyse Affymetrix expression arrays
jma1991/AL_KDR_MIX_D
jma1991/bioinformatics-cookbook
jma1991/bioinformer
jma1991/DataScienceEcosystem
jma1991/EB_KDR
jma1991/EB_KDR_HET_1
jma1991/EB_KDR_HOM_2
jma1991/HT_KDR
jma1991/HT_KDR_HET_A
jma1991/HT_KDR_HOM_B
jma1991/HT_KDR_MIX_C
jma1991/kaggle
jma1991/LPMP
jma1991/LPMP_EHF_B
jma1991/LPMP_LHF_C
jma1991/LPMP_WOT
jma1991/memeth
A Snakemake workflow to analyse Illumina methylation arrays
jma1991/msigdb4mouse
MSigDB gene sets for mouse
jma1991/mulled
Mulled - Automatized Containerized Software Repository
jma1991/multi-package-containers
Testing building mulled containers for multi-requirement tools.
jma1991/rnasplice
rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
jma1991/sbpack
Command line utility to pack and upload/download CWL to/from SB powered platform
jma1991/shrnaseq
jma1991/test-datasets
Test data to be used for automated testing with the nf-core pipelines
jma1991/tldr
📚 Collaborative cheatsheets for console commands
jma1991/YS_KDR