by Jason Moggridge with contributors Nick Werry, Kerry Woolnough and Julia Harvie
The main script - that builds all the classifiers, tests them, and creates all the figures in the submission - is the file 'JMoggridge_Apicomplexa_classifier_notebook.Rmd' (the .pdf version of the same name is a rendered version of the script, output, and written sections of the submission)
The submitted paper is the file 'JMoggridge_parasight_pdf.pdf', which is rendered from the file 'JMoggridge_parasight_pdf.Rmd'.
The original dataset downloaded from NCBI is available upon request