Pinned Repositories
Aranaceae-biodiversity-BOLD
Diversity analysis of DNA barcode specimen data from Barcode of Life Database
bioinfo-notebooks
python implementations of bioinformatics algorithms to solve Rosalind problems
Burbot-variant-calling
Calling genetic variants from Burbot genotyping by sequencing data using freebayes and bcftools
Labrador_ACL_rupture_GWAS
A tutorial script for genome-wide association analysis using Plink with an example dataset from a case-control study of ACL rupture in Labrador retrievers (Baker et al. 2017)
Learn-to-code-R
Learn to Code: R for Data Analysis
ottawabeaches
Ottawa Beaches dashboard: water quality testing and beach status at five public beaches during 2014-2019
ottbike_counters
Ottawa Bike counters: time series analysis dashboard
Parasight
Kmer-based classification of Apicomplexan 18S rRNA genes
Polychaeta-phylogeny
Maximum likelihood phylogeny and testing molecular models of evolution for cytochrome c oxidase subunit 1 sequences of Polynoidae from Barcode of Life Database
tyrosine_recombinases_and_RIT_elements
Master of Bioinformatics thesis project: An HMM-based classifier for tyrosine recombinases and recombinase-in-trio elements
jmoggridge's Repositories
jmoggridge/Learn-to-code-R
Learn to Code: R for Data Analysis
jmoggridge/Burbot-variant-calling
Calling genetic variants from Burbot genotyping by sequencing data using freebayes and bcftools
jmoggridge/GWAS-power-calc-vis
GWAS-power-calc-vis: how much more incremental power does adding additional controls provide in a GWAS experiment where cases are difficult to recruit
jmoggridge/Polychaeta-phylogeny
Maximum likelihood phylogeny and testing molecular models of evolution for cytochrome c oxidase subunit 1 sequences of Polynoidae from Barcode of Life Database
jmoggridge/tyrosine_recombinases_and_RIT_elements
Master of Bioinformatics thesis project: An HMM-based classifier for tyrosine recombinases and recombinase-in-trio elements
jmoggridge/advent-of-code-2021
Advent of code 2021 in R or whatever I feel like
jmoggridge/AdventOfCode2022
jmoggridge/aoc2015
jmoggridge/Arduino
my arduino programs
jmoggridge/beth-stack
jmoggridge/computational-reproducibility-in-r
forked from Nathaniel Haines
jmoggridge/cpso_scraper
jmoggridge/DNA-methylation-prediction
ML for predicting methylation status of CpG sites
jmoggridge/elon-musks-jet
jmoggridge/ez_rentrez
Convenient functions for performing large queries to the NCBI api by wrapping the Rentrez package
jmoggridge/fixed-and-random-effects
Slideshow for 10min talk about fixed and random effects in statistics
jmoggridge/frontendmasters
jmoggridge/Hanukkah_of_data_5783
jmoggridge/jmoggridge
Hi!
jmoggridge/jmoggridge.github.io
my website
jmoggridge/leader-or-lagger
jmoggridge/LearnToCode2023
Lecture materials for Learn To Code sessions 2023
jmoggridge/manubot_template
jmoggridge/moggfit_app
jmoggridge/pandoc-nextjs-server
A simple web UI for Pandoc
jmoggridge/python-github-action-template
Schedule a Python script with GitHub Actions
jmoggridge/rosalind
jmoggridge/stats_analyses
Various analyses in R with tidyverse and (sometimes) tidymodels
jmoggridge/substack_publisher_py
create a substack post using the python-substack api
jmoggridge/webr-node-example
An example of running webR under node.