Pinned Repositories
affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
h5cat
Quick preview of HDF5 files on the command line
jax-workshop
llc-tools
Decorators to make it easier to write SciPy LowLevelCallables
napariboard-proto
Prototype implementation of napari-integrated CNN training viewer
ray
Automatic segmentation of electron microscopy volumes
scipy-japan-2019
NumPy tutorial given at SciPy Japan 2019
skan
Python module to analyse skeleton (thin object) images
streaming-talk
Resources for a talk about streaming data analysis in Python
zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
jni's Repositories
jni/skan
Python module to analyse skeleton (thin object) images
jni/affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
jni/zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
jni/napari
Napari PyQt5 and VisPy based GUI plugin
jni/useful-histories
My repository for particularly useful analyses carried out in IPython (not the notebook)
jni/app-model
Generic application schema implemented in python.
jni/asv
Airspeed Velocity: A simple Python benchmarking tool with web-based reporting
jni/cookiecutter-napari-plugin
Cookiecutter for napari plugins
jni/Czaki.github.io
jni/elegant-scipy
Draft of the book Elegant SciPy for O'Reilly
jni/magicgui
build GUIs from python functions, using magic.
jni/mastodon-bookmark-search
A simple web app to search and explore your Mastodon bookmarks
jni/midi-app-controller
Control napari with a MIDI controller.
jni/napari-console
A plugin that adds a console to napari
jni/napari-defdap
Simple wrapper around DefDAP functionality
jni/napari-demos
Scripts to demonstrate napari with real data
jni/napari-docs
Documentation for napari (other than API docs)
jni/napari-feedstock
A conda-smithy repository for napari.
jni/napari-plugin-template
A template repo used to make new napari plugins
jni/napari-release-tools
Tools for speedup napari release process
jni/napari-svg
A plugin for writing svg files from napari
jni/napari-svg-feedstock
A conda-smithy repository for napari-svg.
jni/napari_dashboard
Dashboard wit hanalitics about napari usage based on public data
jni/nbody-numba
jni/ngff
Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
jni/npe2
jni/ome-zarr-py
Experimental implementation of images in Zarr files.
jni/pyconau24-talk
repo for the 2024 PyCon AU talk by Juan and Draga
jni/talk-napari-fit-2024
jni/zarpaint-feedstock
A conda-smithy repository for zarpaint.