/halfway-to-i2k-skimage-napari

Repo for halfway to i2k workshop: Fundamentals of image analysis in Python with scikit-image, napari, and friends

Primary LanguagePythonBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

Fundamentals of image analysis in Python with scikit-image, napari, and friends

See the tutorial page on the I2K site for details.

Installation & running this tutorial

⚠️ WARNING: You should reinstall this just before the workshop as we might have made some changes by then. ⚠️

First you need to download this tutorial repository to your local machine. You can do so in one of two ways:

  • If you are familiar with git, clone this repository with the command:

    git clone https://github.com/jni/halfway-to-i2k-skimage-napari

    And navigate to the cloned repository.

  • Otherwise, download the repository as a zip file directly using this link: https://github.com/jni/halfway-to-i2k-skimage-napari/archive/refs/heads/main.zip Then, using your file browser, navigate to the downloaded file, unzip it (optionally to a different location on your computer), and navigate to the contents of the folder halfway-to-i2k-skimage-napari.

At this point, follow the installation instructions in the file tutorial/install_dependencies.md