Pinned Repositories
2024_Hobbs_et_al_dendrogram
ESCC_microbiome
Analysis and plotting scripts for the manuscript "An international report on bacterial communities in esophageal squamous cell carcinoma"
python_for_biologists_2023
Teaching from Python for Biologists
SAT
Structural Analysis Toolkit - A python package for manipulation of structural data and structural alignments.
SV40_transcriptome
Toolkit and pipeline for processing short- and long-read RNA sequencing data.
virID
Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.
virKMER
viral KMER enrichment - Used to enrich viral reads in an input dataset
virORF_direct
virORF_direct: Protein-level analysis of direct RNA sequencing data
vpSAT
Virus Protein Structural Analysis Toolkit
jnoms's Repositories
jnoms/virID
Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.
jnoms/vpSAT
Virus Protein Structural Analysis Toolkit
jnoms/SAT
Structural Analysis Toolkit - A python package for manipulation of structural data and structural alignments.
jnoms/virORF_direct
virORF_direct: Protein-level analysis of direct RNA sequencing data
jnoms/virKMER
viral KMER enrichment - Used to enrich viral reads in an input dataset
jnoms/ESCC_microbiome
Analysis and plotting scripts for the manuscript "An international report on bacterial communities in esophageal squamous cell carcinoma"
jnoms/SV40_transcriptome
Toolkit and pipeline for processing short- and long-read RNA sequencing data.
jnoms/2024_Hobbs_et_al_dendrogram
jnoms/python_for_biologists_2023
Teaching from Python for Biologists