Pinned Repositories
covid-profiler
dengue-ngs
genomics_course
NTM-Profiler
Profiling NTM WGS data
ntmdb
pathogen-profiler
This repository contains python classes and functions to quickly create a profiling tool for pathogen NGS data
tb-profiler-webdriver
Allows submitting of fastq files to a remote TB-Profiler server through a lightweight python API
tb-profiler-webserver
tbdb
Standard database for the TBProfiler tool
TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
jodyphelan's Repositories
jodyphelan/tb_bot
jodyphelan/tb_gwas
jodyphelan/who2tbp
A script to convert WHO MTB resistant variants to a format that can be ingested by TBProfiler
jodyphelan/malaria-profiler-webserver
jodyphelan/kmer_analysis
jodyphelan/TB-Profiler-roadmap
jodyphelan/microbiome_practical
jodyphelan/nanopore_practical
jodyphelan/TB_LOF_variants
jodyphelan/tbhgvs
jodyphelan/test-repo-gary
jodyphelan/tb-profiler-webserver
jodyphelan/test-repo
jodyphelan/jodyphelan_github_io_old
jodyphelan/tb-profiler-webdriver
Allows submitting of fastq files to a remote TB-Profiler server through a lightweight python API
jodyphelan/itol-config-generators
jodyphelan/testpackage
My first R package
jodyphelan/test_web
jodyphelan/COVID-immunoanalytics
jodyphelan/PopGenome
PopGenome: An efficient Swiss Army Knife for Population Genomic Analyses in R
jodyphelan/pathogenseq
jodyphelan/piseq
jodyphelan/Cluster_analysis
TB phylogenetic analyses
jodyphelan/meta_data
jodyphelan/tbdb_NC_018143.2
jodyphelan/bioconda-recipes
Conda recipes for the bioconda channel.
jodyphelan/HIV_practical
jodyphelan/MRSA
jodyphelan/minION
jodyphelan/transmit