Pinned Repositories
An-Introduction-To-Applied-Bioinformatics
Interactive lessons in bioinformatics.
cual-id
A package for creating and managing sample identifiers in comparative -omics datasets.
dash-alignment-viewer
dot-files
fastapi-factory
pandas-cookbook
Recipes for using Python's pandas library
pandas-tutorial
Short pandas tutorial for code review.
plotly-notebook
scikit-bio-cookbook
Recipes for bioinformatics analyses with scikit-bio
johnchase's Repositories
johnchase/cual-id
A package for creating and managing sample identifiers in comparative -omics datasets.
johnchase/dash-alignment-viewer
johnchase/fastapi-factory
johnchase/dot-files
johnchase/plotly-notebook
johnchase/scikit-bio-cookbook
Recipes for bioinformatics analyses with scikit-bio
johnchase/thesis_analysis
johnchase/amplicon-pipeline
johnchase/budget-api
johnchase/budget-app
Application for managing a budget and learning Angular
johnchase/calplot
johnchase/demo-api
johnchase/docs
Source repository for https://docs.qiime2.org
johnchase/dotfiles
johnchase/gregcaporaso.github.com-1
Lab website
johnchase/johnchase.github.io
johnchase/jupyterhub
Multi-user server for Jupyter notebooks
johnchase/lab-website
Caporaso Lab website
johnchase/philr
Phylogenetic Isometric Log Ratio
johnchase/python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.
johnchase/q2-dada2
QIIME 2 plugin wrapping DADA2
johnchase/q2-phylofactor
johnchase/q2-quality
Qiime2 plugin for quality checking sequences and feature tables
johnchase/q2-vsearch
vsearch plugin for QIIME 2
johnchase/q2d2
johnchase/qiime2
Official repository for the QIIME 2 framework.
johnchase/scikit-bio
Core objects, functions and statistics for working with biological data in Python.
johnchase/sourcetracker2
SourceTracker2
johnchase/STA_578
Repo for stats homework
johnchase/type-rpg