Pinned Repositories
automaticanalysis
Automatic analysis
bindit
Painless bind mounts in docker and other container runners
Dcm2Bids
Convert DICOM images to BIDS
gwp
Gabor Wavelet Pyramid model for tensorflow
matlab-plotting
Code for bending Matlab's figures to your will.
matlab-studytools
Tools for running psychology experiments in Matlab.
neuroconda
Conda environment for neuroimaging analysis in python, R, etc
notebook_bids_OSD2018
BIDS presentation at Open Science Day, MRC Cognition and Brain Sciences Unit
pilab
Pattern information analysis in Matlab
sana
Representational similarity analysis (RSA) tools for python / numpy / tensorflow
jooh's Repositories
jooh/neuroconda
Conda environment for neuroimaging analysis in python, R, etc
jooh/matlab-studytools
Tools for running psychology experiments in Matlab.
jooh/Dcm2Bids
Convert DICOM images to BIDS
jooh/gwp
Gabor Wavelet Pyramid model for tensorflow
jooh/bindit
Painless bind mounts in docker and other container runners
jooh/pilab
Pattern information analysis in Matlab
jooh/sana
Representational similarity analysis (RSA) tools for python / numpy / tensorflow
jooh/automaticanalysis
Automatic analysis
jooh/johansmatlab
Basic utility functions. Required by all other Matlab code
jooh/PyGaze
an open-source, cross-platform toolbox for minimal-effort programming of eye tracking experiments
jooh/transplant
Transplant is an easy way of calling Matlab from Python
jooh/notebook_bids_OSD2018
BIDS presentation at Open Science Day, MRC Cognition and Brain Sciences Unit
jooh/altair
Declarative statistical visualization library for Python
jooh/ciftify
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
jooh/conda
OS-agnostic, system-level binary package manager and ecosystem
jooh/cookiecutter-hypermodern-python
Hypermodern Python Cookiecutter
jooh/fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
jooh/genericobject_rsa
jooh/jooh.github.io
website
jooh/LaminafMRIsimulations
Based on PhD work of Huang Pei (HP)
jooh/liu_gardner_2018_reanalysis
Use fMRI orientation/contrast dataset to make points about RSA best practices - https://doi.org/10.1523/JNEUROSCI.2453-17.2017
jooh/measurementmodels
Measurement models for representational similarity analysis of functional imaging data
jooh/MVPA_simulations
Simulations comparing sensitivity of various MVPA methods (LDC, Euclidean, SVM discriminant and SVM classification)
jooh/nipype_tutorial
Learn Nipype with these tutorial notebooks - go here to see them online -->
jooh/pybids
Python package to access BIDS datasets
jooh/pycortex
Pycortex is a python-based toolkit for surface visualization of fMRI data
jooh/pyrsa
Python library for Representational Similarity Analysis
jooh/sequel
Trial sequence generation in python
jooh/website
jooh/workshop_pybrain