josegcpa

bovw

Leveraging keypoint detection and description methods for MRI classification.

clonal_dynamics

Code repository for the longitudinal and phylodynamic analysis in "The longitudinal dynamics and natural history of clonal haematopoiesis"

haemorasis

Blood cell detection pipeline in peripheral blood smears

imdm

A simple library to construct image data models for data testing and validation.

labelling-server

Local flask server to label images with a database in sqlite3

nnunet_docker

Utilities to run nnUNet more easily using containers

sondagens

Ferramenta para análise de sondagens (em português)

tab-ssl

torch_nlm

PyTorch-based implementation of non-local means with GPU support.

wbs-prediction

Code repository for project focusing on blood cell detection and diagnostic prediction from peripheral blood slides

josegcpa/haemorasis

Blood cell detection pipeline in peripheral blood smears

josegcpa/torch_nlm

PyTorch-based implementation of non-local means with GPU support.

josegcpa/clonal_dynamics

Code repository for the longitudinal and phylodynamic analysis in "The longitudinal dynamics and natural history of clonal haematopoiesis"

josegcpa/bovw

Leveraging keypoint detection and description methods for MRI classification.

josegcpa/nnunet_docker

Utilities to run nnUNet more easily using containers

josegcpa/sondagens

Ferramenta para análise de sondagens (em português)

josegcpa/tab-ssl

josegcpa/imdm

A simple library to construct image data models for data testing and validation.

josegcpa/quality-net

josegcpa/u-net-tf2

U-Net implementation in Tensorflow2.0

josegcpa/wbs-prediction

Code repository for project focusing on blood cell detection and diagnostic prediction from peripheral blood slides

josegcpa/clonex

Efficient Wright-Fisher simulations for intra-tumour population genetics

josegcpa/labelling-server

Local flask server to label images with a database in sqlite3

josegcpa/country-nationality-list

ISO 3166-1 Country + Nationality listing in multiple formats

josegcpa/fan-tf-2

Implementation of Bug et al.'s feature-aware normalisation model in TF2

josegcpa/josegcpa

Config files for my GitHub profile.

josegcpa/josegcpa.github.io

To visit my website go to

josegcpa/json-haemorasis

git lfs storage for haemorasis json for visualization

josegcpa/nnUNet

Fork of nnUNet, focusing on improving performance of prediction

josegcpa/rbc-segmentation

Red blood cell segmentation and filtering

josegcpa/structural_biology

Scripts developed for structural biology. Currently more of a side/spare-time project than any other thing.

josegcpa/tbca

Code repository for the blood cell atlas (TBCA)

josegcpa/tf-u-net

Training, testing and inference implementations of a U-Net with a few add-ons.

josegcpa/thesis

My PhD thesis.