jr-leary7/SCISSORS

Issues

• long vectors (argument 1) are not supported in .C after integration

  #33 opened 10 months ago by AJTDaedalus
  3

• Error: No cells found in ReclusterCells

  #32 opened 10 months ago by gianfilippo
  0

• add `verbose = TRUE` flag to all functions instead of printing unconditionally

  #30 opened a year ago by jr-leary7
  1

• fix identification of which dimension reductions to re-embed in `ReclusterCells()`

  #29 opened a year ago by jr-leary7
  0

• Improve parallelism performance

  #28 opened a year ago by jr-leary7
  0

• Add % ribosomal protein genes computation to `PrepareData()`

  #27 opened a year ago by jr-leary7
  0

• add GitHub action to run code coverage with `codecov`

  #26 opened 2 years ago by jr-leary7
  0

• Add GitHub action to run R CMD CHECK on push to main

  #25 opened 2 years ago by jr-leary7
  0

• Add README badges

  #24 opened 2 years ago by jr-leary7
  0

• Add dynamically-generated README.Rmd

  #19 opened 2 years ago by jr-leary7
  0

• Add package citation

  #22 opened 2 years ago by jr-leary7
  0

• Improve handling of integrated datasets

  #21 opened 2 years ago by jr-leary7
  0

• Improve speed / memory usage in `CosineDist()`

  #20 opened 2 years ago by jr-leary7
  0

• Add `R CMD CHECK` & code coverage badges to README

  #18 opened 2 years ago by jr-leary7
  0

• Add unit tests

  #17 opened 2 years ago by jr-leary7
  0

• Reduce complexity of `ReclusterCells()`

  #16 opened 2 years ago by jr-leary7
  0

• Add images of output to README.md

  #13 opened 2 years ago by jr-leary7
  0

• Convert main `ReclusterCells()` loop to parallel

  #5 opened 2 years ago by jr-leary7
  0

• Add support for `Seurat` integration workflow

  #2 opened 3 years ago by jr-leary7
  0

• Add support for multiple assays to `ChoosePCs()`

  #4 opened 3 years ago by jr-leary7
  0

• Add support for log-normalization workflow in `Seurat` object

  #1 opened 3 years ago by jr-leary7
  0

• Add support for generalized reclustering for arbitrary Idents

  #3 opened 3 years ago by jr-leary7
  0